Gm14917 (predicted gene 14917) - Rat Genome Database

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Gene: Gm14917 (predicted gene 14917) Mus musculus
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Symbol: Gm14917
Name: predicted gene 14917
RGD ID: 5146873
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: Hsp90ab1  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X116,780,233 - 116,782,369 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX116,780,233 - 116,782,337 (-)EnsemblGRCm39 Ensembl
GRCm38X117,870,536 - 117,872,672 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX117,870,536 - 117,872,640 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X114,984,145 - 114,986,281 (-)NCBIGRCm37MGSCv37mm9NCBIm37
CeleraX104,565,144 - 104,566,301 (-)NCBICelera
Cytogenetic MapXE1NCBI
cM MapX49.58NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm14917
67 total Variants

Predicted Target Of
Summary Value
Count of predictions:89
Count of miRNA genes:86
Interacting mature miRNAs:87
Transcripts:ENSMUST00000118872
Prediction methods:Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined47179121129764756Mouse
13208552Wght12_mweight 12 (mouse)X94043606149782996Mouse
4141803Lmr30_mleishmaniasis resistance 30 (mouse)Not determined85062606119062720Mouse
13208556Lgth14_mbody length 14 (mouse)X94043606149782996Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X54045360148782996Mouse
1357823Spha3_msperm head anomaly 3 (mouse)Not determinedX102055848162758941Mouse
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse
4141665Mhysq2_mmale hybrid sterility QTL 2 (mouse)Not determined71453852139203212Mouse






RefSeq Transcripts NG_017948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BX119960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000118872
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX116,780,233 - 116,782,337 (-)Ensembl
GRCm38.p6 EnsemblX117,870,536 - 117,872,640 (-)Ensembl


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000081659 Ensembl, ENTREZGENE
MGD MGI:3712369 ENTREZGENE
NCBI Gene 100418292 ENTREZGENE
PhenoGen Gm14917 PhenoGen