Gm16545 (predicted gene 16545) - Rat Genome Database

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Gene: Gm16545 (predicted gene 16545) Mus musculus
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Symbol: Gm16545
Name: predicted gene 16545
RGD ID: 5146820
MGI Page MGI
Description:
Type: pseudo (Ensembl: unprocessed_pseudogene)
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391444,311,894 - 44,312,485 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1444,312,018 - 44,312,480 (+)EnsemblGRCm39 Ensembl
GRCm381444,074,466 - 44,075,028 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1444,074,561 - 44,075,023 (+)EnsemblGRCm38mm10GRCm38
MGSCv371444,652,102 - 44,652,693 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Cytogenetic Map14C1NCBI
cM Map1422.52NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm16545
2 total Variants

Predicted Target Of
Summary Value
Count of predictions:140
Count of miRNA genes:135
Interacting mature miRNAs:138
Transcripts:ENSMUST00000161968
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 27 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1300625Cosz2_mcocaine seizure 2 (mouse)Not determined143504579768785736Mouse
1301777Bglq15_mbody growth late QTL 15 (mouse)Not determined144296241676962593Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
27226775Tibl7_mtibia length 7, 5 week (mouse)143032195748837457Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
1300544Hypn_mhyperinsulinemia (mouse)Not determined141516061649160765Mouse
1300998Cia17_mcollagen induced arthritis 17 (mouse)Not determined143033525064335381Mouse
1300805Mors3_mmodifier of obesity related sterility 3 (mouse)Not determined144303727077037418Mouse
4141864Mrdq4_mmodifier of retinal degeneration QTL 4 (mouse)Not determined992324548765082Mouse

1 to 10 of 27 rows






Ensembl Acc Id: ENSMUST00000161968
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1444,312,018 - 44,312,480 (+)Ensembl
GRCm38.p6 Ensembl1444,074,561 - 44,075,023 (+)Ensembl


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000090259 Ensembl
MGD MGI:4414965 ENTREZGENE
NCBI Gene Gm16545 ENTREZGENE
PhenoGen Gm16545 PhenoGen