Gm14133 (predicted gene 14133) - Rat Genome Database

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Gene: Gm14133 (predicted gene 14133) Mus musculus
Analyze
Symbol: Gm14133
Name: predicted gene 14133
RGD ID: 5146373
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392149,595,804 - 149,640,740 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2149,584,071 - 149,640,750 (-)EnsemblGRCm39 Ensembl
GRCm382149,753,884 - 149,798,820 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2149,743,927 - 149,798,743 (-)EnsemblGRCm38mm10GRCm38
MGSCv372149,579,622 - 149,624,479 (-)NCBIGRCm37MGSCv37mm9NCBIm37
Celera2150,998,141 - 151,042,944 (-)NCBICelera
Cytogenetic Map2G3NCBI
cM Map273.8NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073   PMID:18799693   PMID:24316575   PMID:28705898  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:217
Count of miRNA genes:202
Interacting mature miRNAs:210
Transcripts:ENSMUST00000139471, ENSMUST00000148202
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301907Rends_mrenal disease susceptibility (mouse)Not determined2135699221169699361Mouse
1301783Bhr1_mbronchial hyperresponsiveness 1 (mouse)Not determined2142593476178442452Mouse
12790983Bwq12_mbody weight QTL 12 (mouse)2148238204181755017Mouse
11038702Ltpr2_mLeishmania tropica response 2 (mouse)2103095716167212356Mouse
12910799Pwgrq2_mpre-weaning growth rate QTL 2 (mouse)2118589253160611165Mouse
1558939Gnf1_mgrowth and fatness 1 (mouse)Not determined2143773445169117924Mouse
12910795Pwbwq5_mpost-weaning body weight QTL 5 (mouse)2118589253160611165Mouse
11353826Bdln10_mbody length 10 (mouse)2140441482174441482Mouse
1300867Lore2_mloss of righting induced by ethanol 2 (mouse)Not determined2144515861180896594Mouse
1558917Gct8_mgranulosa cell tumorigenesis 8 (mouse)Not determined2149236907181755017Mouse
1300806Aod4_mautoimmune ovarian dysgenesis 4 (mouse)Not determined2145228719179228841Mouse
27226761Feml18_mfemur length 18, 16 week (mouse)294230345154241920Mouse
4141033Wg2d_mweight gain in high growth mice 2d (mouse)Not determined143773445160303008Mouse
12910812Pwgrq1_mpre-weaning growth rate QTL 1 (mouse)2118589253160611165Mouse
1301961Bts1_mbladder tumor susceptibility 1 (mouse)Not determined2132024159166024330Mouse
12910814Pwbwq1_mpre-weaning body weight QTL 1 (mouse)2118589253160611165Mouse
1301618Bglu1_mblood glucose level 1 (mouse)Not determined2117942930174324863Mouse
27226749Femd10_mfemur midshaft diameter 10, 16 week (mouse)2124441920168241920Mouse
10045885Cplaq15_mcircadian period of locomotor activity 15 (mouse)Not determined2110916118154354667Mouse
10054066Bwq9_mbody weight QTL 9 (mouse)Not determined2135699221169699361Mouse
1302143Bwq5_mbody weight (mouse)Not determined2127664019161664118Mouse
1301822Pgia2_mproteoglycan induced arthritis 2 (mouse)Not determined2123937311157937424Mouse
10043956Gnf5_mgrowth and fatness 5 (mouse)Not determined2135699221169699361Mouse
5491197Mobq5_mmultigenic obesity QTL 5 (mouse)Not determined265269746162518926Mouse
1302013Tbbmd3_mtotal body bone mineral density 3 (mouse)Not determined2145196949179197085Mouse
5491196Mobq6_mmultigenic obesity QTL 6 (mouse)Not determined285724269180896594Mouse
12880427V25Dq3_mvitamin D inactive form serum level QTL 3 (mouse)2129341920163341920Mouse
13504830Bacsq1_mbaculum shape QTL 1 (mouse)2145716184161016184Mouse
12801456Intmrm1_mintima/media ratio modifier 1 (mouse)2142428347176428450Mouse
1301031Bdln3_mbody length 3 (mouse)Not determined2127664019161664118Mouse
1558881Ses7_msalmonella enteritidis susceptibility 7 (mouse)Not determined2116306330150306474Mouse
11049566Lmr28e_mleishmaniasis resistance 28e (mouse)2133144911167145058Mouse
12801461Intim1_mintima modifier 1 (mouse)2142428347176428450Mouse
11049567Lmr28f_mleishmaniasis resistance 28f (mouse)2133144911167145058Mouse
11341717Rvfs1_mRift Valley fever susceptibility 1 (mouse)2135432544173449616Mouse
4141703Chlq13_mcirculating hormone level QTL 13 (mouse)Not determined2135699221169699361Mouse
1357484Bsbob_mBSB obesity (mouse)Not determined2143773445165665019Mouse
1301865Hdlq19_mHDL QTL 19 (mouse)Not determined2145518775179518926Mouse
27226788Feml13_mfemur length 13, 10 week (mouse)2102630345159941920Mouse
1301295Prdt1_mprion disease incubation time 1 (mouse)Not determined2116077623150077741Mouse
4142211Nilac3_mnicotine induced locomotor activity 3 (mouse)Not determined2148664893181755017Mouse
1301294Hrtfm5_mheart failure modifier 5 (mouse)Not determined2122883015156883131Mouse
1300846Pbwg11_mpostnatal body weight growth 11 (mouse)Not determined2138966600172966729Mouse


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000139471
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2149,595,799 - 149,640,750 (-)Ensembl
GRCm38.p6 Ensembl2149,753,888 - 149,798,743 (-)Ensembl
Ensembl Acc Id: ENSMUST00000148202
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2149,584,071 - 149,640,694 (-)Ensembl
GRCm38.p6 Ensembl2149,743,927 - 149,798,701 (-)Ensembl
Ensembl Acc Id: ENSMUST00000310396
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2149,584,716 - 149,588,649 (-)Ensembl
Ensembl Acc Id: ENSMUST00000310397
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2149,584,766 - 149,588,661 (-)Ensembl
Ensembl Acc Id: ENSMUST00000310398
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2149,584,768 - 149,588,633 (-)Ensembl
Ensembl Acc Id: ENSMUST00000310399
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2149,584,770 - 149,588,633 (-)Ensembl
Ensembl Acc Id: ENSMUST00000310400
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2149,584,913 - 149,588,633 (-)Ensembl
Ensembl Acc Id: ENSMUST00000310401
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2149,584,718 - 149,586,186 (-)Ensembl
Ensembl Acc Id: ENSMUST00000310402
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2149,584,760 - 149,586,184 (-)Ensembl
Ensembl Acc Id: ENSMUST00000310403
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2149,584,774 - 149,586,130 (-)Ensembl
Ensembl Acc Id: ENSMUST00000310404
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2149,584,924 - 149,586,190 (-)Ensembl
Ensembl Acc Id: ENSMUST00000310405
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2149,584,767 - 149,585,810 (-)Ensembl
Ensembl Acc Id: ENSMUST00000310406
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2149,584,767 - 149,585,442 (-)Ensembl
RefSeq Acc Id: NR_166392
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392149,595,804 - 149,640,740 (-)NCBI
GRCm382149,753,884 - 149,798,820 (-)NCBI
Sequence:
Promoters
RGD ID:6879082
Promoter ID:EPDNEW_M2992
Type:multiple initiation site
Name:AK086556_1
Description:n/a
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382149,798,814 - 149,798,874EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000087029 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000139471 ENTREZGENE
MGD MGI:3651594 ENTREZGENE
NCBI Gene 100503289 ENTREZGENE
PhenoGen Gm14133 PhenoGen
RNAcentral URS0001980EFB RNACentral