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Gene: Gm16677 (predicted gene, 16677) Mus musculus

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Symbol:

Gm16677

Name:

predicted gene, 16677

RGD ID:

5145085

MGI Page

MGI

Description:

Type:

ncrna (Ensembl: lncRNA)

RefSeq Status:

VALIDATED

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	69,567,156 - 69,574,586 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	69,544,999 - 69,574,621 (-)	Ensembl		GRCm39 Ensembl
GRCm38	14	69,329,707 - 69,337,137 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	69,327,999 - 69,337,165 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	69,946,056 - 69,955,166 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
Celera	14	67,103,107 - 67,110,537 (-)	NCBI		Celera
Cytogenetic Map	14	D2	NCBI
cM Map	14	36.05	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

PMID:10349636	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851	PMID:16141072	PMID:16141073	PMID:24200680	PMID:24316575	PMID:27899360

Predicted Target Of

	Summary Value
Count of predictions:	152
Count of miRNA genes:	141
Interacting mature miRNAs:	148
Transcripts:	ENSMUST00000181229
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1357589	Kdnw2_m	kidney weight 2 (mouse)			Not determined		14	20887473	121269804	Mouse
1301777	Bglq15_m	body growth late QTL 15 (mouse)			Not determined		14	42962416	76962593	Mouse
1301489	Lbm10_m	lean body mass 10 (mouse)			Not determined		14	53761296	87761529	Mouse
1357527	Epfpq1_m	epididymal fat percentage QTL 1 (mouse)			Not determined		14	21062450	71885801	Mouse
1301424	Skull21_m	skull morphology 21 (mouse)			Not determined		14	42962416	76962593	Mouse
4142364	Pbwg18_m	postnatal body weight growth 18 (mouse)			Not determined		14	52281984	86282125	Mouse
4141400	Nilac8_m	nicotine induced locomotor activity 8 (mouse)			Not determined		14	43065847	77066045	Mouse
10043889	Cia52_m	collagen induced arthritis QTL 52 (mouse)			Not determined		14	56082381	90082509	Mouse
27226774	Tibl15_m	tibia length 15, 10 week (mouse)					14	30321957	87937436	Mouse
1301562	Hwq1_m	heart weight quantitative locus 1 (mouse)			Not determined		14	56546745	90546941	Mouse
1357565	wrmod1_m	wobbler modifier 1 (mouse)			Not determined		14	58179640	101859473	Mouse
1300666	Fembm2_m	femoral bone morphometry 2 (mouse)			Not determined		14	62397460	96397680	Mouse
4142419	Tgq26_m	triglyceride QTL 26 (mouse)			Not determined			40337319	74337319	Mouse
1300605	El5_m	epilepsy 5 (mouse)			Not determined		14	49455425	83455556	Mouse
11039527	Ccc2_m	colitis susceptibility in the Collaborative Cross 2 (mouse)					14	59918612	94138217	Mouse
1301091	Bbaa21_m	B.burgdorferi-associated arthritis 21 (mouse)			Not determined		14	43065847	77066045	Mouse
12880432	Fgf23lq3_m	FGF23 serum level QTL 3 (mouse)					14	53937440	87937440	Mouse
10043887	Cia50_m	collagen induced arthritis QTL 50 (mouse)			Not determined		14	37430185	71430320	Mouse
1300805	Mors3_m	modifier of obesity related sterility 3 (mouse)			Not determined		14	43037270	77037418	Mouse

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	NR_045091	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC134575	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK046150	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KY467705	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000181229

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,565,448 - 69,574,619 (-)	Ensembl
GRCm38.p6 Ensembl	14	69,327,999 - 69,337,082 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000229002

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,567,156 - 69,574,586 (-)	Ensembl
GRCm38.p6 Ensembl	14	69,329,707 - 69,337,114 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000229604

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,571,184 - 69,574,614 (-)	Ensembl
GRCm38.p6 Ensembl	14	69,333,735 - 69,337,165 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000229870

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,566,999 - 69,574,616 (-)	Ensembl
GRCm38.p6 Ensembl	14	69,329,707 - 69,337,097 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361168

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,548,974 - 69,574,585 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361169

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,548,974 - 69,574,555 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361170

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,548,979 - 69,574,555 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361171

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,548,983 - 69,574,558 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361172

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,548,979 - 69,574,530 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361173

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,548,974 - 69,574,524 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361174

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,548,991 - 69,574,540 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361175

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,555,345 - 69,574,559 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361176

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,555,725 - 69,574,586 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361177

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,545,001 - 69,559,516 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361178

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,544,999 - 69,558,044 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361179

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,545,000 - 69,557,388 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361180

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,544,999 - 69,557,118 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361181

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,545,001 - 69,557,114 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361182

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,555,365 - 69,566,983 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361183

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,548,979 - 69,559,516 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361184

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,548,979 - 69,559,511 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361185

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,548,979 - 69,558,815 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361186

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,565,276 - 69,574,611 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361187

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,548,940 - 69,557,462 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361188

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,548,966 - 69,557,424 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361189

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,548,978 - 69,557,121 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361190

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,548,989 - 69,557,118 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361191

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,548,994 - 69,557,115 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361192

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,566,997 - 69,574,619 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361193

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,566,999 - 69,574,586 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361194

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,567,147 - 69,574,621 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361195

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,567,141 - 69,574,607 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361196

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,567,156 - 69,574,588 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361197

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,567,156 - 69,574,586 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361198

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,567,156 - 69,574,586 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361199

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,567,156 - 69,574,586 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361200

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,567,156 - 69,574,585 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361201

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,567,157 - 69,574,576 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361202

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,567,156 - 69,574,573 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361203

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,567,156 - 69,574,561 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361204

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,567,156 - 69,574,559 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361205

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,567,156 - 69,574,558 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361206

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,567,155 - 69,574,555 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361207

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,545,001 - 69,552,063 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361208

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,548,978 - 69,552,546 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361209

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,548,993 - 69,552,509 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361210

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,548,974 - 69,552,062 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000361211

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	14	69,555,143 - 69,557,338 (-)	Ensembl

RefSeq Acc Id:

NR_045091

RefSeq Status:

VALIDATED

Type:

NON-CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	14	69,567,156 - 69,574,586 (-)	NCBI
GRCm38	14	69,329,707 - 69,337,137 (-)	ENTREZGENE
Celera	14	67,103,107 - 67,110,537 (-)	NCBI
cM Map	14		ENTREZGENE

Sequence:

show sequence

AGGAGGCGAGAGCGCGCGCGCTGGGGAGGGTGGGAAAAACGGACCTGCGTGGGGCAGGGCCTACCGGATGATTGGCACCGAGTGCTGGGTTAGCCTCCCGACTCCTGCTAGGCTCCCTCGGTGCTGAG
TGAACGAGCGCCACGTGGCTCTTGGCCACTTCTGGCTAGCCTGGTTGTCCCCAAGCTGCAAGGTGATGAATCCCATGGAGTGACGACATTCTATTCCTCAAGATCCGACCTTCTCACATTCTGCCTCT
CTTCCATCAGACTGTTCAAACAATGGACTGGAAGAAATTGCAGTTTCCCCAGGACTCTCATTCTGGAAGAAGAGAAAGATTAAAGCCTGGACCAGCCAGAGAGGAAACTTATCTCCTGGAACTTTTAA
ACCACTGTGCCAAAAACACTCCAGTCCTCCACTTACACTGTAACCTTGGGTCAGGACCCTGAAGATGCACTTGGAAAGTTACTGGGCCTCTCTGTCTCTGTTCCTACTGTGCTCATATTAAATTAATT
TCCCTCTTC

hide sequence

Database	Acc Id	Source(s)
Ensembl Genes	ENSMUSG00000097511	Ensembl, ENTREZGENE
Ensembl Transcript	ENSMUST00000361204	ENTREZGENE
MGD	MGI:4439601	ENTREZGENE
NCBI Gene	100504477	ENTREZGENE
PhenoGen	Gm16677	PhenoGen
RNAcentral	URS000075ED33	RNACentral
	URS000077F02C	RNACentral
	URS0000D6270A	RNACentral
	URS0000D6313D	RNACentral
	URS0000D63DD3	RNACentral

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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