Gm18367 (predicted gene, 18367) - Rat Genome Database

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Gene: Gm18367 (predicted gene, 18367) Mus musculus
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Symbol: Gm18367
Name: predicted gene, 18367
RGD ID: 5143191
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: Hmgb3  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914115,793,153 - 115,794,092 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl14115,793,335 - 115,793,934 (-)EnsemblGRCm39 Ensembl
GRCm3814115,555,741 - 115,556,680 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl14115,555,923 - 115,556,522 (-)EnsemblGRCm38mm10GRCm38
MGSCv3714115,955,163 - 115,955,744 (-)NCBIGRCm37MGSCv37mm9NCBIm37
Celera14114,142,598 - 114,143,179 (-)NCBICelera
Cytogenetic Map14E4NCBI
cM Map1459.72NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm18367
31 total Variants

Predicted Target Of
Summary Value
Count of predictions:68
Count of miRNA genes:66
Interacting mature miRNAs:68
Transcripts:ENSMUST00000176139
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
4142508Tgq25_mtriglyceride QTL 25 (mouse)Not determined85134068119134068Mouse
12903991Opfaq4_mopen field activity QTL 4 (mouse)14111211209118699845Mouse
12792981Fbmd5_mfemoral bone mineral density 5, females only (mouse)1499838217125033054Mouse
10755523Hgb2_mhemoglobin 2 (mouse)14105884654125139656Mouse
12798541Scvg3_msubcutaneous vessel growth QTL 3 (mouse)14105544636117275989Mouse
RefSeq Transcripts NG_019935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC154340 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000176139
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl14115,793,335 - 115,793,934 (-)Ensembl
GRCm38.p6 Ensembl14115,555,923 - 115,556,522 (-)Ensembl


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000093589 Ensembl
MGD MGI:5010552 ENTREZGENE
NCBI Gene 100417023 ENTREZGENE
PhenoGen Gm18367 PhenoGen