Gm19610 (predicted gene, 19610) - Rat Genome Database

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Gene: Gm19610 (predicted gene, 19610) Mus musculus
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Symbol: Gm19610
Name: predicted gene, 19610
RGD ID: 5140749
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: MODEL
Previously known as: Gm42532
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39591,198,903 - 91,222,794 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl591,198,968 - 91,283,840 (-)EnsemblGRCm39 Ensembl
GRCm38591,051,269 - 91,074,935 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl591,051,871 - 91,074,773 (-)EnsemblGRCm38mm10GRCm38
MGSCv37591,503,641 - 91,517,606 (-)NCBIGRCm37MGSCv37mm9NCBIm37
Celera589,212,781 - 89,225,906 (-)NCBICelera
Cytogenetic Map5E1NCBI
cM Map544.78NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm19610
1194 total Variants

1 to 10 of 57 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
4140990Lgq6_mlate growth QTL 6 (mouse)Not determined32133234100777931Mouse
1301010ahl2_mage related hearing loss 2 (mouse)Not determined56265056896650688Mouse
1301399Cpfd3_mcerebellum pattern fissures (mouse)Not determined587386871121387065Mouse
12910784Pwgrq15_mpost-weaning growth rate QTL 15 (mouse)57717582397658215Mouse
1301524Lmb2_mlupus in MRL and B6 F2 cross (mouse)Not determined537581488112465722Mouse
25314315Mlh1fc4_mMLH1 foci count 4 (mouse)574460661132528839Mouse
1357725Eae39_mexperimental allergic encephalomyelitis 39 (mouse)Not determined589418876118864028Mouse
10045972Tir5_mtrypanosome infection response 5 (mouse)Not determined563705442104387065Mouse
1300993Hycdc_mhypercapnic duty cycle (mouse)Not determined590561006124561151Mouse
1301126Bwem1_mbody weight day 30 males 1 (mouse)Not determined587386871121387065Mouse

1 to 10 of 57 rows





RefSeq Transcripts XR_001784889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC109311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000202894
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl591,199,730 - 91,222,632 (-)Ensembl
GRCm38.p6 Ensembl591,051,871 - 91,074,773 (-)Ensembl
Ensembl Acc Id: ENSMUST00000379723
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl591,199,728 - 91,283,840 (-)Ensembl
Ensembl Acc Id: ENSMUST00000379724
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl591,199,728 - 91,283,821 (-)Ensembl
Ensembl Acc Id: ENSMUST00000379725
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl591,199,725 - 91,283,799 (-)Ensembl
Ensembl Acc Id: ENSMUST00000379726
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl591,199,728 - 91,283,781 (-)Ensembl
Ensembl Acc Id: ENSMUST00000379727
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl591,198,968 - 91,222,744 (-)Ensembl
Ensembl Acc Id: ENSMUST00000379728
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl591,220,696 - 91,222,677 (-)Ensembl
RefSeq Acc Id: XR_001784889
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39591,198,903 - 91,222,794 (-)NCBI
Sequence:
RGD ID:15092884
Promoter ID:EPDNEWNC_M802
Type:multiple initiation site
Name:Gm19610_1
Description:predicted gene, 19610 [Source:MGI Symbol;Acc:MGI:5011795]
SO ACC ID:SO:0000170
Source:EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38591,074,761 - 91,074,821EPDNEWNC


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000107350 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000379727 ENTREZGENE
MGD MGI:5011795 ENTREZGENE
NCBI Gene Gm19610 ENTREZGENE
PhenoGen Gm19610 PhenoGen
RNAcentral URS00008C433F RNACentral