LOC119877181 (histone H2A type 2-A) - Rat Genome Database

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Gene: LOC119877181 (histone H2A type 2-A) Canis lupus familiaris
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Symbol: LOC119877181
Name: histone H2A type 2-A
RGD ID: 40922370
Description: ENCODES a protein that exhibits DNA binding (inferred); protein heterodimerization activity (inferred); structural constituent of chromatin (inferred); FOUND IN chromosome (inferred); nucleosome (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
NCBI Annotation Information: Annotation category: not annotated on reference assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
UU_Cfam_GSD_1.01759,803,986 - 59,804,571 (-)NCBIUU_Cfam_GSD_1.0


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
chromosome  (IEA)
nucleosome  (IEA)
nucleus  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_038562072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAAHUQ010000209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_038562072   ⟹   XP_038418000
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01759,803,986 - 59,804,571 (-)NCBI
Protein Sequences
Protein RefSeqs XP_038418000 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00040015141.1
RefSeq Acc Id: XP_038418000   ⟸   XM_038562072
- UniProtKB: A0A8C0MB26 (UniProtKB/TrEMBL),   A0A8C0S313 (UniProtKB/TrEMBL),   A0A8P0TT34 (UniProtKB/TrEMBL)
Protein Domains
Histone H2A C-terminal   Histone H2A/H2B/H3


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00040009418 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00040017454.1 UniProtKB/TrEMBL
Gene3D-CATH Histone, subunit A UniProtKB/TrEMBL
InterPro Histone-fold UniProtKB/TrEMBL
  Histone_H2A UniProtKB/TrEMBL
  Histone_H2A/H2B/H3 UniProtKB/TrEMBL
  Histone_H2A_C UniProtKB/TrEMBL
  Histone_H2A_CS UniProtKB/TrEMBL
NCBI Gene LOC119877181 ENTREZGENE
PANTHER HISTONE H2A UniProtKB/TrEMBL
  HISTONE H2A TYPE 1-E UniProtKB/TrEMBL
Pfam Histone UniProtKB/TrEMBL
  Histone_H2A_C UniProtKB/TrEMBL
PRINTS HISTONEH2A UniProtKB/TrEMBL
PROSITE HISTONE_H2A UniProtKB/TrEMBL
SMART H2A UniProtKB/TrEMBL
Superfamily-SCOP Histone-fold UniProtKB/TrEMBL
UniProt A0A8C0MB26 ENTREZGENE
  A0A8C0S313 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0TT34 ENTREZGENE