LOC119867743 (small nucleolar RNA SNORD116) - Rat Genome Database

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Gene: LOC119867743 (small nucleolar RNA SNORD116) Canis lupus familiaris
Analyze
Symbol: LOC119867743 (Ensembl: SNORD116)
Name: small nucleolar RNA SNORD116
RGD ID: 40917637
Description: ASSOCIATED WITH Angelman syndrome (ortholog); autistic disorder (ortholog); chromosome 15q11.2 deletion syndrome (ortholog)
Type: pseudo (Ensembl: snoRNA)
RefSeq Status: MODEL
RGD Orthologs
Human
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha1448,637,672 - 48,637,759 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01449,138,318 - 49,138,405 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1449,138,318 - 49,138,405 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11449,237,627 - 49,237,714 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01448,920,657 - 48,920,744 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01449,292,335 - 49,292,422 (-)NCBIUU_Cfam_GSD_1.0


Disease Annotations     Click to see Annotation Detail View

References

Genomics

Comparative Map Data
LOC119867743
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha1448,637,672 - 48,637,759 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01449,138,318 - 49,138,405 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1449,138,318 - 49,138,405 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11449,237,627 - 49,237,714 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01448,920,657 - 48,920,744 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01449,292,335 - 49,292,422 (-)NCBIUU_Cfam_GSD_1.0
SNORD116-30
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381525,108,268 - 25,108,352 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1525,108,268 - 25,108,352 (+)EnsemblGRCh38hg38GRCh38
GRCh371525,353,415 - 25,353,499 (+)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map15q11.2NCBI
CHM1_11525,302,933 - 25,303,017 (+)NCBICHM1_1
T2T-CHM13v2.01522,844,925 - 22,845,009 (+)NCBIT2T-CHM13v2.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSCAFT00845052892
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1449,138,318 - 49,138,405 (-)Ensembl

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00845029868 Ensembl, ENTREZGENE
NCBI Gene LOC119867743 ENTREZGENE