LOC119871403 (60S ribosomal protein L17) - Rat Genome Database

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Gene: LOC119871403 (60S ribosomal protein L17) Canis lupus familiaris
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Symbol: LOC119871403 (Ensembl: RPL17)
Name: 60S ribosomal protein L17
RGD ID: 40913591
Description: ENCODES a protein that exhibits structural constituent of ribosome (inferred); INVOLVED IN translation (inferred); FOUND IN large ribosomal subunit (inferred); ribonucleoprotein complex (inferred); ribosome (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
NCBI Annotation Information: Annotation category: not annotated on reference assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha112,655,146 - 12,655,792 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0 Ensembl779,330,961 - 79,334,979 (+)EnsemblROS_Cfam_1.0 Ensembl


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
translation  (IEA)

Cellular Component

Molecular Function

References

Genomics


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_038472750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_038472750   ⟹   XP_038328678
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha112,655,146 - 12,655,792 (+)NCBI
Protein Sequences
Protein RefSeqs XP_038328678 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000028105.3
  ENSCAFP00000041510.2
  ENSCAFP00030001661.1
  ENSCAFP00040022387.1
  ENSCAFP00845022945.1
  ENSCAFP00845022982.1
RefSeq Acc Id: XP_038328678   ⟸   XM_038472750
- UniProtKB: A0A8C0SK31 (UniProtKB/TrEMBL),   A0A8I3S244 (UniProtKB/TrEMBL),   A0A8C0R9Y9 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000019044 UniProtKB/TrEMBL
  ENSCAFG00000030361 UniProtKB/TrEMBL
  ENSCAFG00030001056 UniProtKB/TrEMBL
  ENSCAFG00040013886 UniProtKB/TrEMBL
  ENSCAFG00845016396 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000001644.4 UniProtKB/TrEMBL
  ENSCAFT00000030248.5 UniProtKB/TrEMBL
  ENSCAFT00030001868.1 UniProtKB/TrEMBL
  ENSCAFT00040025741.1 UniProtKB/TrEMBL
  ENSCAFT00845029177.1 UniProtKB/TrEMBL
  ENSCAFT00845029221.1 UniProtKB/TrEMBL
Gene3D-CATH 3.90.470.10 UniProtKB/TrEMBL
InterPro Ribosomal_L22 UniProtKB/TrEMBL
  Ribosomal_L22/L17_CS UniProtKB/TrEMBL
  Ribosomal_L22/L17_euk/arc UniProtKB/TrEMBL
  Ribosomal_L22/L17_sf UniProtKB/TrEMBL
NCBI Gene LOC119871403 ENTREZGENE
PANTHER 60S RIBOSOMAL PROTEIN L17 UniProtKB/TrEMBL
  PTHR11593 UniProtKB/TrEMBL
Pfam Ribosomal_L22 UniProtKB/TrEMBL
PROSITE RIBOSOMAL_L22 UniProtKB/TrEMBL
Superfamily-SCOP SSF54843 UniProtKB/TrEMBL
UniProt A0A8C0R9Y9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SK31 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3RZB6_CANLF UniProtKB/TrEMBL
  A0A8I3S244 ENTREZGENE, UniProtKB/TrEMBL