LOC119868948 (ornithine aminotransferase, mitochondrial) - Rat Genome Database

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Gene: LOC119868948 (ornithine aminotransferase, mitochondrial) Canis lupus familiaris
Analyze
No known orthologs.
Symbol: LOC119868948
Name: ornithine aminotransferase, mitochondrial
RGD ID: 40909358
Description: ENCODES a protein that exhibits ornithine aminotransferase activity (inferred); pyridoxal phosphate binding (inferred); transaminase activity (inferred); INVOLVED IN L-proline biosynthetic process (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
UMICH_Zoey_3.12833,877,174 - 33,902,340 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02833,869,335 - 33,894,743 (-)NCBIUNSW_CanFamBas_1.0


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA)

Molecular Function

References

Genomics


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_038515440   ⟹   XP_038371368
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12833,877,174 - 33,902,340 (-)NCBI
RefSeq Acc Id: XM_038515442   ⟹   XP_038371370
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12833,877,174 - 33,902,280 (-)NCBI
RefSeq Acc Id: XM_038515443   ⟹   XP_038371371
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12833,877,174 - 33,902,340 (-)NCBI
RefSeq Acc Id: XM_038643264   ⟹   XP_038499192
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02833,869,335 - 33,894,743 (-)NCBI
RefSeq Acc Id: XM_038643265   ⟹   XP_038499193
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02833,869,335 - 33,894,683 (-)NCBI
RefSeq Acc Id: XM_038643266   ⟹   XP_038499194
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02833,869,335 - 33,894,743 (-)NCBI
RefSeq Acc Id: XP_038371368   ⟸   XM_038515440
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038371371   ⟸   XM_038515443
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038371370   ⟸   XM_038515442
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038499192   ⟸   XM_038643264
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038499194   ⟸   XM_038643266
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038499193   ⟸   XM_038643265
- Peptide Label: isoform X3


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00845025131 UniProtKB/TrEMBL
  ENSCAFG00845025816 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00845044357.1 UniProtKB/TrEMBL
  ENSCAFT00845045550 ENTREZGENE
  ENSCAFT00845045550.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.640.10 UniProtKB/TrEMBL
  3.90.1150.10 UniProtKB/TrEMBL
InterPro Aminotrans_3 UniProtKB/TrEMBL
  Aminotrans_3_PPA_site UniProtKB/TrEMBL
  Class-III_PLP-dep_AT UniProtKB/TrEMBL
  Orn_aminotrans UniProtKB/TrEMBL
  PyrdxlP-dep_Trfase UniProtKB/TrEMBL
  PyrdxlP-dep_Trfase_major UniProtKB/TrEMBL
  PyrdxlP-dep_Trfase_small UniProtKB/TrEMBL
NCBI Gene LOC119868948 ENTREZGENE
PANTHER AMINOTRANSFERASE CLASS III UniProtKB/TrEMBL
  ORNITHINE AMINOTRANSFERASE, MITOCHONDRIAL UniProtKB/TrEMBL
Pfam Aminotran_3 UniProtKB/TrEMBL
PIRSF Transaminase_4ab_Lys_Orn UniProtKB/TrEMBL
PROSITE AA_TRANSFER_CLASS_3 UniProtKB/TrEMBL
Superfamily-SCOP SSF53383 UniProtKB/TrEMBL
UniProt A0A8I3PPT0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PS42_CANLF UniProtKB/TrEMBL