LOC119867884 (U1 spliceosomal RNA) - Rat Genome Database

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Gene: LOC119867884 (U1 spliceosomal RNA) Canis lupus familiaris
Analyze
Symbol: LOC119867884 (Ensembl: U1)
Name: U1 spliceosomal RNA
RGD ID: 40907594
Description: ASSOCIATED WITH schizophrenia (ortholog)
Type: snrna
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha36616,874 - 617,037 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.036597,371 - 597,534 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl36597,371 - 597,534 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.136602,995 - 603,158 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.036666,036 - 666,199 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.036679,833 - 679,996 (+)NCBIUU_Cfam_GSD_1.0


Disease Annotations     Click to see Annotation Detail View

References

Genomics

Comparative Map Data
LOC119867884
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha36616,874 - 617,037 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.036597,371 - 597,534 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl36597,371 - 597,534 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.136602,995 - 603,158 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.036666,036 - 666,199 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.036679,833 - 679,996 (+)NCBIUU_Cfam_GSD_1.0
RNVU1-31
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381145,465,617 - 145,465,780 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1145,465,617 - 145,465,780 (-)EnsemblGRCh38hg38GRCh38
Cytogenetic Map1q21.1NCBI
T2T-CHM13v2.01144,582,485 - 144,582,648 (-)NCBIT2T-CHM13v2.0
Gm22614
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39396,396,045 - 96,396,209 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl396,396,045 - 96,396,209 (+)EnsemblGRCm39 Ensembl
GRCm38396,488,729 - 96,488,893 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl396,488,729 - 96,488,893 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic Map3F2.1NCBI


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSCAFT00845043554
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl36597,371 - 597,534 (+)Ensembl
RefSeq Acc Id: XR_005308021
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.036597,371 - 597,534 (+)NCBI
RefSeq Acc Id: XR_005318293
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha36616,874 - 617,037 (+)NCBI
RefSeq Acc Id: XR_005351067
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.136602,995 - 603,158 (+)NCBI
RefSeq Acc Id: XR_005384931
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.036679,833 - 679,996 (+)NCBI
RefSeq Acc Id: XR_005418648
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.036666,036 - 666,199 (+)NCBI

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00845024679 Ensembl, ENTREZGENE
Ensembl Transcript ENSCAFT00845043554 ENTREZGENE
NCBI Gene LOC119867884 ENTREZGENE