LOC134485113 (meiosis regulator and mRNA stability factor 1-like) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: LOC134485113 (meiosis regulator and mRNA stability factor 1-like) Rattus norvegicus
Analyze
Symbol: LOC134485113
Name: meiosis regulator and mRNA stability factor 1-like
RGD ID: 402199253
Description: ENCODES a protein that exhibits RNA binding (inferred); RNA nuclease activity (inferred); INVOLVED IN meiotic cell cycle (inferred); oogenesis (inferred); regulation of gene expression (inferred); FOUND IN peroxisome (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81100,105,226 - 100,164,047 (+)NCBIGRCr8


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA)
peroxisome  (IEA)

Molecular Function

References

Genomics


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_063280925   ⟹   XP_063136995
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81100,105,226 - 100,164,047 (+)NCBI
RefSeq Acc Id: XM_063280926   ⟹   XP_063136996
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81100,105,226 - 100,164,047 (+)NCBI
Protein Sequences
Protein RefSeqs XP_063136995 (Get FASTA)   NCBI Sequence Viewer  
  XP_063136996 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000087197.1
RefSeq Acc Id: XP_063136995   ⟸   XM_063280925
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GEW4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063136996   ⟸   XM_063280926
- Peptide Label: isoform X2
- UniProtKB: A0A8I6GEW4 (UniProtKB/TrEMBL)
Protein Domains
HTH OST-type   RRM

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSRNOG00000051237 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000076542.2 UniProtKB/TrEMBL
Gene3D-CATH 3.30.70.330 UniProtKB/TrEMBL
  LOTUS domain-like UniProtKB/TrEMBL
InterPro LOTUS-like UniProtKB/TrEMBL
  Marf1 UniProtKB/TrEMBL
  MARF1_LOTUS UniProtKB/TrEMBL
  MARF1_RRM2 UniProtKB/TrEMBL
  Nucleotide-bd_a/b_plait_sf UniProtKB/TrEMBL
  NYN UniProtKB/TrEMBL
  OST-HTH/LOTUS_dom UniProtKB/TrEMBL
  RBD_domain_sf UniProtKB/TrEMBL
  RRM_dom UniProtKB/TrEMBL
NCBI Gene LOC134485113 ENTREZGENE
PANTHER LIMKAIN B LKAP UniProtKB/TrEMBL
  MEIOSIS REGULATOR AND MRNA STABILITY FACTOR 1 UniProtKB/TrEMBL
Pfam MARF1_LOTUS UniProtKB/TrEMBL
  NYN UniProtKB/TrEMBL
  OST-HTH UniProtKB/TrEMBL
  RRM_1 UniProtKB/TrEMBL
PhenoGen LOC134485113 PhenoGen
PROSITE HTH_OST UniProtKB/TrEMBL
  RRM UniProtKB/TrEMBL
RatGTEx ENSRNOG00000051237 RatGTEx
SMART RRM UniProtKB/TrEMBL
Superfamily-SCOP RNA-binding domain, RBD UniProtKB/TrEMBL
UniProt A0A8I6GEW4 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-03-05 LOC134485113  meiosis regulator and mRNA stability factor 1-like      Symbol and Name status set to provisional 70820 PROVISIONAL