LOC129661880 (ReSE screen-validated silencer GRCh37_chr6:165708186-165708356) - Rat Genome Database

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Gene: LOC129661880 (ReSE screen-validated silencer GRCh37_chr6:165708186-165708356) Homo sapiens
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Symbol: LOC129661880
Name: ReSE screen-validated silencer GRCh37_chr6:165708186-165708356
RGD ID: 329341633
Description: This genomic sequence represents an accessible chromatin region used in a lentiviral ReSE (repressive ability of silencer elements) screen that assays for cell survival based on transcriptional repression of an apoptosis-inducing fusion protein. This region was identified as a functional silencer in K562 erythroleukemia cells. [provided by RefSeq, Apr 2023]
Type: biological-region
RefSeq Status: REVIEWED
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386165,294,697 - 165,294,867 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh376165,708,186 - 165,708,356 (+)NCBIGRCh37GRCh37hg19GRCh37
T2T-CHM13v2.06166,660,769 - 166,660,939 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:32094911  


Genomics


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1643404BMD3_HBone mineral density QTL 3 (human)2.420.0005Bone mineral density6157563614170805979Human
1643367BW323_HBody weight QTL 323 (human)2.420.0005Body fat amount6157563614170805979Human


Expression

RNA-SEQ Expression


Sequence



Additional Information

Database Acc Id Source(s)
COSMIC LOC129661880 COSMIC
GTEx LOC129661880 GTEx
Human Proteome Map LOC129661880 Human Proteome Map
NCBI Gene LOC129661880 ENTREZGENE