LOC129664636 (ReSE screen-validated silencer GRCh37_chr20:46979410-46979659) - Rat Genome Database

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Gene: LOC129664636 (ReSE screen-validated silencer GRCh37_chr20:46979410-46979659) Homo sapiens
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Symbol: LOC129664636
Name: ReSE screen-validated silencer GRCh37_chr20:46979410-46979659
RGD ID: 329340095
Description: This genomic sequence represents an accessible chromatin region used in a lentiviral ReSE (repressive ability of silencer elements) screen that assays for cell survival based on transcriptional repression of an apoptosis-inducing fusion protein. This region was identified as a functional silencer in phorbol 12-myristate 13-acetate-treated (for megakaryocytic differentiation) K562 erythroleukemia cells. [provided by RefSeq, Apr 2023]
Type: biological-region
RefSeq Status: REVIEWED
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382048,350,667 - 48,350,916 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh372046,979,410 - 46,979,659 (+)NCBIGRCh37GRCh37hg19GRCh37
T2T-CHM13v2.02050,119,477 - 50,119,726 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:32094911  


Genomics


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2292864PRSTS43_HProstate tumor susceptibility QTL 43 (human)0.620.05Prostate tumor susceptibility204730303964444167Human
1300007BP29_HBlood pressure QTL 29 (human)Blood pressurehypertension susceptibility203653600562536005Human


Expression

RNA-SEQ Expression


Sequence



Additional Information

Database Acc Id Source(s)
COSMIC LOC129664636 COSMIC
GTEx LOC129664636 GTEx
Human Proteome Map LOC129664636 Human Proteome Map
NCBI Gene LOC129664636 ENTREZGENE