LOC117976254 (eukaryotic translation initiation factor 4E) - Rat Genome Database

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Gene: LOC117976254 (eukaryotic translation initiation factor 4E) Pan paniscus
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Symbol: LOC117976254
Name: eukaryotic translation initiation factor 4E
RGD ID: 32729437
Description: ENCODES a protein that exhibits RNA 7-methylguanosine cap binding (inferred); RNA binding (inferred); translation initiation factor activity (inferred); INVOLVED IN mRNA transport (inferred); regulation of translation (inferred); translation (inferred); FOUND IN cytoplasm (inferred); eukaryotic translation initiation factor 4F complex (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21874,630,244 - 74,631,887 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11680,543,053 - 80,544,714 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01645,447,170 - 45,448,815 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_034940346 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_034940346   ⟹   XP_034796237
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21874,630,244 - 74,631,887 (-)NCBI
NHGRI_mPanPan11680,543,053 - 80,544,714 (-)NCBI
Mhudiblu_PPA_v01645,447,170 - 45,448,815 (-)NCBI
Protein Sequences
Protein RefSeqs XP_034796237 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000042128.1
RefSeq Acc Id: XP_034796237   ⟸   XM_034940346
- UniProtKB: A0A2R9CM77 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000043652 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000065057.1 UniProtKB/TrEMBL
Gene3D-CATH RNA Cap, Translation Initiation Factor Eif4e UniProtKB/TrEMBL
InterPro TIF_eIF4e-like UniProtKB/TrEMBL
  TIF_eIF_4E UniProtKB/TrEMBL
  TIF_eIF_4E_CS UniProtKB/TrEMBL
NCBI Gene LOC117976254 ENTREZGENE
PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E UniProtKB/TrEMBL
  EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED UniProtKB/TrEMBL
Pfam IF4E UniProtKB/TrEMBL
PROSITE IF4E UniProtKB/TrEMBL
Superfamily-SCOP eIF4e-like UniProtKB/TrEMBL
UniProt A0A2R9CM77 ENTREZGENE, UniProtKB/TrEMBL