Gm12441 (predicted gene 12441) - Rat Genome Database

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Gene: Gm12441 (predicted gene 12441) Mus musculus
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Symbol: Gm12441
Name: predicted gene 12441
RGD ID: 2311988
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39399,007,983 - 99,008,470 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl399,007,883 - 99,008,470 (-)EnsemblGRCm39 Ensembl
GRCm38399,100,667 - 99,101,154 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl399,100,567 - 99,101,154 (-)EnsemblGRCm38mm10GRCm38
MGSCv37398,904,590 - 98,905,077 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36398,904,590 - 98,905,077 (-)NCBIMGSCv36mm8
Cytogenetic Map3F2.2NCBI
cM Map343.03NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm12441
34 total Variants

Predicted Target Of
Summary Value
Count of predictions:137
Count of miRNA genes:131
Interacting mature miRNAs:135
Transcripts:ENSMUST00000121806
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 47 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
4142399Aec1_mautoimmune exocrinopathy 1 (mouse)Not determined7586174102690034Mouse
26884378Skwq6_mskull length QTL 6, 10 week (mouse)351907421102307316Mouse
1301971Cia5_mcollagen induced arthritis QTL 5 (mouse)Not determined366046658100046795Mouse
1301392Eae3_msusceptibility to experimental allergic encephalomyelitis 3 (mouse)Not determined379548730113548837Mouse
1301904Iba2_minduction of brown adipocytes 2 (mouse)Not determined382147043116147184Mouse
26884382Bzwq1_mbi-zygomatic width QTL 1, 5 week (mouse)352207421137205761Mouse
11041900Lmr11a_mleishmaniasis resistance 11a (mouse)383463991117464137Mouse
1301398Rapop3_mradiation-induced apoptosis 3 (mouse)Not determined390511217100464137Mouse
26884380Skwq1_mskull length QTL 1, 5 week (mouse)343954435101607316Mouse
14746984Manh54_mmandible shape 54 (mouse)385289152119289152Mouse

1 to 10 of 47 rows
48.MMHAP81FLH6.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38399,101,154 - 99,101,353UniSTSGRCm38
MGSCv37398,905,077 - 98,905,276UniSTSGRCm37
Cytogenetic Map3F2.2UniSTS
Whitehead_YAC3 UniSTS







Ensembl Acc Id: ENSMUST00000121806
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl399,007,883 - 99,008,470 (-)Ensembl
GRCm38.p6 Ensembl399,100,567 - 99,101,154 (-)Ensembl


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000083888 Ensembl
MGD MGI:3649265 ENTREZGENE
NCBI Gene Gm12441 ENTREZGENE
PhenoGen Gm12441 PhenoGen