Gm9701 (predicted gene 9701) - Rat Genome Database

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Gene: Gm9701 (predicted gene 9701) Mus musculus
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Symbol: Gm9701
Name: predicted gene 9701
RGD ID: 2308700
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: MODEL
Previously known as: 676984
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39362,831,179 - 62,831,679 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl362,831,228 - 62,831,654 (-)EnsemblGRCm39 Ensembl
GRCm38362,923,758 - 62,924,258 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl362,923,807 - 62,924,233 (-)EnsemblGRCm38mm10GRCm38
MGSCv37362,727,726 - 62,728,155 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36362,727,663 - 62,728,167 (-)NCBIMGSCv36mm8
Celera362,591,445 - 62,591,874 (-)NCBICelera
Cytogenetic Map3E1NCBI
cM Map329.97NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm9701
24 total Variants

Predicted Target Of
Summary Value
Count of predictions:44
Count of miRNA genes:34
Interacting mature miRNAs:34
Transcripts:ENSMUST00000077976, ENSMUST00000116115
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 42 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
4142399Aec1_mautoimmune exocrinopathy 1 (mouse)Not determined7586174102690034Mouse
14746977Manh53_mmandible shape 53 (mouse)33592528069925280Mouse
26884378Skwq6_mskull length QTL 6, 10 week (mouse)351907421102307316Mouse
15039332Nmrs6_mNAFLD-associated magnetic resonance shift 6 (mouse)33417074168170741Mouse
1301585Cd4ts1_mCD4 T cell subset 1 (mouse)Not determined33970410273704231Mouse
4141116Lgaq4_mlate growth adjusted QTL 4 (mouse)Not determined1024922183184946Mouse
4141563Lgq3_mlate growth QTL 3 (mouse)Not determined1024922183184946Mouse
1357584Splq6_mspleen weight QTL 6 (mouse)Not determined31024922183184946Mouse
26884382Bzwq1_mbi-zygomatic width QTL 1, 5 week (mouse)352207421137205761Mouse
11041901Lmr11b_mleishmaniasis resistance 11b (mouse)33970410273704231Mouse

1 to 10 of 42 rows





GenBank Nucleotide AC119861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000077976
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl362,831,228 - 62,831,654 (-)Ensembl
GRCm38.p6 Ensembl362,923,807 - 62,924,233 (-)Ensembl


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000063001 Ensembl, ENTREZGENE
MGD MGI:3780108 ENTREZGENE
NCBI Gene 676984 ENTREZGENE
PhenoGen Gm9701 PhenoGen