RPS26P56 (ribosomal protein S26 pseudogene 56) - Rat Genome Database

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Gene: RPS26P56 (ribosomal protein S26 pseudogene 56) Homo sapiens
Analyze
Symbol: RPS26P56
Name: ribosomal protein S26 pseudogene 56
RGD ID: 2304729
HGNC Page HGNC:35858
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: RPS26_23_1811
Related Functional Gene: RPS26  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X129,408,382 - 129,408,690 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX129,408,382 - 129,408,621 (+)EnsemblGRCh38hg38GRCh38
GRCh37X128,542,359 - 128,542,667 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X128,542,300 - 128,542,598 (+)NCBINCBI36Build 36hg18NCBI36
CeleraX128,931,011 - 128,931,309 (+)NCBICelera
Cytogenetic MapXq25NCBI
CHM1_1X128,453,691 - 128,453,989 (+)NCBICHM1_1
T2T-CHM13v2.0X127,726,909 - 127,727,217 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:19123937  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:80
Count of miRNA genes:78
Interacting mature miRNAs:79
Transcripts:ENST00000444468
Prediction methods:Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
65 153 167 146 337 98 156 28 109 21 143 459 394 7 249 81 144 114 8

Sequence


Ensembl Acc Id: ENST00000444468
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblX129,408,382 - 129,408,621 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC RPS26P56 COSMIC
Ensembl Genes ENSG00000226339 Ensembl
GTEx ENSG00000226339 GTEx
HGNC ID HGNC:35858 ENTREZGENE
Human Proteome Map RPS26P56 Human Proteome Map
NCBI Gene 100271400 ENTREZGENE