Gm14140 (predicted gene 14140) - Rat Genome Database

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Gene: Gm14140 (predicted gene 14140) Mus musculus
Analyze
Symbol: Gm14140
Name: predicted gene 14140
RGD ID: 2295505
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: Rexo4  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392149,952,503 - 149,953,540 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2149,952,502 - 149,953,496 (-)EnsemblGRCm39 Ensembl
GRCm382150,110,583 - 150,111,620 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2150,110,582 - 150,111,576 (-)EnsemblGRCm38mm10GRCm38
MGSCv372149,936,315 - 149,937,312 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362149,785,937 - 149,804,172 (-)NCBIMGSCv36mm8
Celera2151,354,856 - 151,355,853 (-)NCBICelera
Cytogenetic Map2G3NCBI
cM Map274.0NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


PMID:21267068  



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Variants in Gm14140
61 total Variants

Predicted Target Of
Summary Value
Count of predictions:106
Count of miRNA genes:102
Interacting mature miRNAs:105
Transcripts:ENSMUST00000119999
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 43 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1301907Rends_mrenal disease susceptibility (mouse)Not determined2135699221169699361Mouse
1301783Bhr1_mbronchial hyperresponsiveness 1 (mouse)Not determined2142593476178442452Mouse
12790983Bwq12_mbody weight QTL 12 (mouse)2148238204181755017Mouse
11038702Ltpr2_mLeishmania tropica response 2 (mouse)2103095716167212356Mouse
12910799Pwgrq2_mpre-weaning growth rate QTL 2 (mouse)2118589253160611165Mouse
1558939Gnf1_mgrowth and fatness 1 (mouse)Not determined2143773445169117924Mouse
12910795Pwbwq5_mpost-weaning body weight QTL 5 (mouse)2118589253160611165Mouse
11353826Bdln10_mbody length 10 (mouse)2140441482174441482Mouse
1300867Lore2_mloss of righting induced by ethanol 2 (mouse)Not determined2144515861180896594Mouse
1558917Gct8_mgranulosa cell tumorigenesis 8 (mouse)Not determined2149236907181755017Mouse

1 to 10 of 43 rows





RefSeq Transcripts NG_017527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AL831742 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000119999
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2149,952,502 - 149,953,496 (-)Ensembl
GRCm38.p6 Ensembl2150,110,582 - 150,111,576 (-)Ensembl


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000083055 Ensembl, ENTREZGENE
MGD MGI:3649719 ENTREZGENE
NCBI Gene 279056 ENTREZGENE
PhenoGen Gm14140 PhenoGen