Gm7781 (predicted gene 7781) - Rat Genome Database

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Gene: Gm7781 (predicted gene 7781) Mus musculus
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Symbol: Gm7781
Name: predicted gene 7781
RGD ID: 2295195
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: MODEL
Previously known as: EG665773
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X129,404,100 - 129,426,161 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX129,425,386 - 129,426,173 (+)EnsemblGRCm39 Ensembl
GRCm38X130,503,351 - 130,525,412 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX130,524,637 - 130,525,424 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X127,037,887 - 127,059,960 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X125,851,520 - 125,871,759 (+)NCBIMGSCv36mm8
CeleraX113,392,282 - 113,414,164 (+)NCBICelera
Cytogenetic MapXE3NCBI
cM MapX53.17NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm7781
521 total Variants

Predicted Target Of
Summary Value
Count of predictions:163
Count of miRNA genes:152
Interacting mature miRNAs:162
Transcripts:ENSMUST00000117258
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 11 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
4141630Gct6_mgranulosa cell tumorigenesis 6 (mouse)Not determined47179121129764756Mouse
13208552Wght12_mweight 12 (mouse)X94043606149782996Mouse
13208556Lgth14_mbody length 14 (mouse)X94043606149782996Mouse
13824980Ferq1_mgenetic fertility QTL 1 (mouse)X54045360148782996Mouse
25314309Syncl5_msynaptonemal complex length 5 (mouse)X121909697152582996Mouse
13824981Svwq2_mseminal vesicle weight QTL 2 (mouse)X128900749153782996Mouse
1301209Cia19_mcollagen induced arthritis 19 (mouse)Not determinedX120993165160213038Mouse
10412164Cmv2_mcytomegalovirus resistance 2 (mouse)Not determinedX125685149159685269Mouse
1357823Spha3_msperm head anomaly 3 (mouse)Not determinedX102055848162758941Mouse
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse

1 to 10 of 11 rows
MARC_4339-4340:996679552:1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X130,524,997 - 130,525,181UniSTSGRCm38
MGSCv37X127,059,533 - 127,059,717UniSTSGRCm37
CeleraX113,413,737 - 113,413,921UniSTS
Cytogenetic MapXE3UniSTS






GenBank Nucleotide AL807775 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000117258
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX129,425,386 - 129,426,173 (+)Ensembl
GRCm38.p6 EnsemblX130,524,637 - 130,525,424 (+)Ensembl


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000081456 Ensembl, ENTREZGENE
MGD MGI:3643104 ENTREZGENE
NCBI Gene 665773 ENTREZGENE
PhenoGen Gm7781 PhenoGen