TDP1 (tyrosyl-DNA phosphodiesterase 1) - Rat Genome Database

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Gene: TDP1 (tyrosyl-DNA phosphodiesterase 1) Chlorocebus sabaeus
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Symbol: TDP1
Name: tyrosyl-DNA phosphodiesterase 1
RGD ID: 20866764
Description: ENCODES a protein that exhibits 3'-tyrosyl-DNA phosphodiesterase activity (inferred); double-stranded DNA binding (inferred); exonuclease activity (inferred); INVOLVED IN DNA repair (inferred); double-strand break repair (inferred); single strand break repair (inferred); FOUND IN cytoplasm (inferred); intracellular membrane-bounded organelle (inferred); nucleoplasm (inferred)
Type: protein-coding
Latest Assembly: ChlSab1.1 Ensembl - Green Monkey 1.1 Assembly Ensembl
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl2467,679,206 - 67,762,941 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics


Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 20 36 36 60 20

Sequence

Nucleotide Sequences

Ensembl Acc Id: ENSCSAT00000009560   ⟹   ENSCSAP00000007671
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl2467,679,206 - 67,762,941 (+)Ensembl
Protein Sequences
Ensembl Protein ENSCSAP00000007671.1
Ensembl Acc Id: ENSCSAP00000007671   ⟸   ENSCSAT00000009560


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000011473 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000009560.1 UniProtKB/TrEMBL
Gene3D-CATH Endonuclease Chain A UniProtKB/TrEMBL
InterPro Tdp1 UniProtKB/TrEMBL
PANTHER PTHR12415 UniProtKB/TrEMBL
  TYROSYL-DNA PHOSPHODIESTERASE 1 UniProtKB/TrEMBL
Pfam Tyr-DNA_phospho UniProtKB/TrEMBL
Superfamily-SCOP Phospholipase D/nuclease UniProtKB/TrEMBL
UniProt A0A0D9RGD2_CHLSB UniProtKB/TrEMBL