USP50 (ubiquitin specific peptidase 50) - Rat Genome Database

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Gene: USP50 (ubiquitin specific peptidase 50) Chlorocebus sabaeus
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Symbol: USP50
Name: ubiquitin specific peptidase 50
RGD ID: 20866722
Description: ENCODES a protein that exhibits cysteine-type deubiquitinase activity (inferred); peptidase activity (inferred); ubiquitin-like protein peptidase activity (inferred); INVOLVED IN nuclear speck organization (inferred); positive regulation of interleukin-1 beta production (inferred); positive regulation of NLRP3 inflammasome complex assembly (inferred); FOUND IN centrosome (inferred); cytoplasm (inferred); nucleus (inferred)
Type: protein-coding
Latest Assembly: ChlSab1.1 Ensembl - Green Monkey 1.1 Assembly Ensembl
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl2632,786,271 - 32,792,010 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
centrosome  (IEA)
cytoplasm  (IEA)
nucleus  (IEA)

Molecular Function

References

Genomics


Expression

RNA-SEQ Expression

ectoderm
hemolymphoid system
mesenchyme
mesoderm
nervous system
8 18 18 18 8

Sequence

Nucleotide Sequences

Ensembl Acc Id: ENSCSAT00000009170   ⟹   ENSCSAP00000007192
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl2632,786,271 - 32,792,010 (+)Ensembl
Protein Sequences
Ensembl Protein ENSCSAP00000007192.1
Ensembl Acc Id: ENSCSAP00000007192   ⟸   ENSCSAT00000009170


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000010971 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000009170.1 UniProtKB/TrEMBL
Gene3D-CATH Cysteine proteinases UniProtKB/TrEMBL
InterPro Papain-like_cys_pep_sf UniProtKB/TrEMBL
  Peptidase_C19_UCH UniProtKB/TrEMBL
  Ub_carboxyl-term_hydrolase UniProtKB/TrEMBL
  USP_CS UniProtKB/TrEMBL
  USP_dom UniProtKB/TrEMBL
PANTHER INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 50 UniProtKB/TrEMBL
  UBIQUITIN CARBOXYL-TERMINAL HYDROLASE UniProtKB/TrEMBL
Pfam UCH UniProtKB/TrEMBL
PROSITE USP_1 UniProtKB/TrEMBL
  USP_3 UniProtKB/TrEMBL
Superfamily-SCOP SSF54001 UniProtKB/TrEMBL
UniProt A0A0D9RF03_CHLSB UniProtKB/TrEMBL