UBQLN4 (ubiquilin 4) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: UBQLN4 (ubiquilin 4) Chlorocebus sabaeus
Analyze
Symbol: UBQLN4
Name: ubiquilin 4
RGD ID: 20865793
Description: ENCODES a protein that exhibits identical protein binding (inferred); K48-linked polyubiquitin modification-dependent protein binding (inferred); polyubiquitin modification-dependent protein binding (inferred); INVOLVED IN cellular response to stress (inferred); DNA damage response (inferred); negative regulation of autophagosome maturation (inferred); FOUND IN autophagosome (inferred); cytoplasm (inferred); cytosol (inferred)
Type: protein-coding
Latest Assembly: ChlSab1.1 Ensembl - Green Monkey 1.1 Assembly Ensembl
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl207,811,220 - 7,821,203 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics


Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 20 36 36 60 20

Sequence

Nucleotide Sequences

Ensembl Acc Id: ENSCSAT00000000110   ⟹   ENSCSAP00000015942
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl207,811,220 - 7,821,203 (+)Ensembl
Protein Sequences
Ensembl Protein ENSCSAP00000015942.1
Ensembl Acc Id: ENSCSAP00000015942   ⟸   ENSCSAT00000000110


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000002093 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000000110.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.260.100 UniProtKB/TrEMBL
InterPro STI1_HS-bd UniProtKB/TrEMBL
  Ubiquilin UniProtKB/TrEMBL
  Ubiquitin-like_dom UniProtKB/TrEMBL
  Ubiquitin-like_domsf UniProtKB/TrEMBL
PANTHER UBIQUILIN UniProtKB/TrEMBL
  UBIQUILIN-4 UniProtKB/TrEMBL
Pfam ubiquitin UniProtKB/TrEMBL
PROSITE UBIQUITIN_2 UniProtKB/TrEMBL
SMART STI1 UniProtKB/TrEMBL
  UBQ UniProtKB/TrEMBL
Superfamily-SCOP SSF54236 UniProtKB/TrEMBL
UniProt A0A0D9S503_CHLSB UniProtKB/TrEMBL