LOC101707539 (histone H3.3-like) - Rat Genome Database

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Gene: LOC101707539 (histone H3.3-like) Heterocephalus glaber
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Symbol: LOC101707539
Name: histone H3.3-like
RGD ID: 18936611
Description: ENCODES a protein that exhibits DNA binding (inferred); protein heterodimerization activity (inferred); structural constituent of chromatin (inferred); FOUND IN nucleosome (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248023,005,741 - 3,006,456 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
nucleosome  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_004861107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01071012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_004861107   ⟹   XP_004861164
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248023,005,741 - 3,006,456 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004861164 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_004861164   ⟸   XM_004861107
- UniProtKB: A0AAX6PY05 (UniProtKB/TrEMBL),   G5BG93 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000020439 ENTREZGENE
Ensembl Transcript ENSHGLT00000028649 ENTREZGENE
Gene3D-CATH Histone, subunit A UniProtKB/TrEMBL
InterPro Histone-fold UniProtKB/TrEMBL
  Histone_H2A/H2B/H3 UniProtKB/TrEMBL
  Histone_H3/CENP-A UniProtKB/TrEMBL
NCBI Gene LOC101707539 ENTREZGENE
PANTHER HISTONE H3 UniProtKB/TrEMBL
Pfam Histone UniProtKB/TrEMBL
PRINTS HISTONEH3 UniProtKB/TrEMBL
PROSITE HISTONE_H3_1 UniProtKB/TrEMBL
SMART SM00428 UniProtKB/TrEMBL
Superfamily-SCOP Histone-fold UniProtKB/TrEMBL
UniProt A0AAX6PY05 ENTREZGENE, UniProtKB/TrEMBL
  G5BG93 ENTREZGENE, UniProtKB/TrEMBL