LOC101704344 (olfactory receptor 5B17) - Rat Genome Database

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Pathways
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Gene: LOC101704344 (olfactory receptor 5B17) Heterocephalus glaber
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Symbol: LOC101704344 (Ensembl: OR5B17)
Name: olfactory receptor 5B17
RGD ID: 18930296
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248642,542,321 - 2,543,265 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248642,542,321 - 2,543,265 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000028656   ⟹   ENSHGLP00000028235
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046248642,542,321 - 2,543,265 (+)Ensembl
RefSeq Acc Id: XM_004869853   ⟹   XP_004869910
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248642,542,321 - 2,543,265 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004869910 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHA98306 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000028235
RefSeq Acc Id: XP_004869910   ⟸   XM_004869853
- UniProtKB: A0AAX6Q922 (UniProtKB/TrEMBL),   G5AMP6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000028235   ⟸   ENSHGLT00000028656


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000020446 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000028656 ENTREZGENE
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
NCBI Gene LOC101704344 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 5B17 UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0AAX6Q922 ENTREZGENE, UniProtKB/TrEMBL
  G5AMP6 ENTREZGENE, UniProtKB/TrEMBL