LOC101712598 (histone H2A type 1) - Rat Genome Database

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Gene: LOC101712598 (histone H2A type 1) Heterocephalus glaber
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Symbol: LOC101712598
Name: histone H2A type 1
RGD ID: 18920601
Description: ENCODES a protein that exhibits DNA binding (inferred); protein heterodimerization activity (inferred); structural constituent of chromatin (inferred); FOUND IN chromosome (inferred); nucleosome (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475624,454,943 - 24,456,606 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
chromosome  (IEA)
nucleosome  (IEA)
nucleus  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_021260816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01036810 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_021260816   ⟹   XP_021116475
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475624,454,943 - 24,456,606 (+)NCBI
Protein Sequences
Protein RefSeqs XP_021116475 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_021116475   ⟸   XM_021260816
- UniProtKB: G5BSF8 (UniProtKB/TrEMBL),   G5BQE2 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Gene3D-CATH Histone, subunit A UniProtKB/TrEMBL
InterPro Histone-fold UniProtKB/TrEMBL
  Histone_H2A UniProtKB/TrEMBL
  Histone_H2A/H2B/H3 UniProtKB/TrEMBL
  Histone_H2A_C UniProtKB/TrEMBL
  Histone_H2A_CS UniProtKB/TrEMBL
NCBI Gene LOC101712598 ENTREZGENE
PANTHER HISTONE H2A UniProtKB/TrEMBL
Pfam Histone UniProtKB/TrEMBL
  Histone_H2A_C UniProtKB/TrEMBL
PRINTS HISTONEH2A UniProtKB/TrEMBL
PROSITE HISTONE_H2A UniProtKB/TrEMBL
SMART H2A UniProtKB/TrEMBL
Superfamily-SCOP Histone-fold UniProtKB/TrEMBL
UniProt G5BQE2 ENTREZGENE, UniProtKB/TrEMBL
  G5BSF8 ENTREZGENE