LOC101720265 (tubulin alpha-4A chain) - Rat Genome Database

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Gene: LOC101720265 (tubulin alpha-4A chain) Heterocephalus glaber
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Symbol: LOC101720265 (Ensembl: TUBA4A)
Name: tubulin alpha-4A chain
RGD ID: 18918571
Description: ENCODES a protein that exhibits GTP binding (inferred); hydrolase activity (inferred); metal ion binding (inferred); INVOLVED IN microtubule cytoskeleton organization (inferred); microtubule-based process (inferred); mitotic cell cycle (inferred); FOUND IN cytoplasm (inferred); cytoskeleton (inferred); microtubule (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Tuba4a; tubulin alpha 4a
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248235,759,558 - 5,763,910 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248235,760,105 - 5,763,915 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics


Sequence


Ensembl Acc Id: ENSHGLT00000015096   ⟹   ENSHGLP00000014946
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046248235,759,558 - 5,763,910 (+)Ensembl
Ensembl Acc Id: ENSHGLT00000015097   ⟹   ENSHGLP00000014947
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_0046248235,761,985 - 5,762,872 (+)Ensembl
RefSeq Acc Id: XM_004864537   ⟹   XP_004864594
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046248235,760,105 - 5,763,915 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004864594 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHA97558 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000014946
RefSeq Acc Id: XP_004864594   ⟸   XM_004864537
- UniProtKB: G5AKJ8 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000014946   ⟸   ENSHGLT00000015096
Ensembl Acc Id: ENSHGLP00000014947   ⟸   ENSHGLT00000015097


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000010691 Ensembl, ENTREZGENE
Ensembl Transcript ENSHGLT00000015096 ENTREZGENE
Gene3D-CATH Helix hairpin bin UniProtKB/TrEMBL
  Tubulin/FtsZ, C-terminal domain UniProtKB/TrEMBL
  Tubulin/FtsZ, GTPase domain UniProtKB/TrEMBL
InterPro Alpha_tubulin UniProtKB/TrEMBL
  Tub_FtsZ_C UniProtKB/TrEMBL
  Tubulin UniProtKB/TrEMBL
  Tubulin/FtsZ-like_C UniProtKB/TrEMBL
  Tubulin/FtsZ_2-layer-sand-dom UniProtKB/TrEMBL
  Tubulin/FtsZ_GTPase_sf UniProtKB/TrEMBL
  Tubulin_C UniProtKB/TrEMBL
  Tubulin_CS UniProtKB/TrEMBL
  Tubulin_FtsZ_GTPase UniProtKB/TrEMBL
NCBI Gene LOC101720265 ENTREZGENE
PANTHER TUBULIN UniProtKB/TrEMBL
  TUBULIN ALPHA-4A CHAIN UniProtKB/TrEMBL
Pfam Tubulin UniProtKB/TrEMBL
  Tubulin_C UniProtKB/TrEMBL
PRINTS ALPHATUBULIN UniProtKB/TrEMBL
  TUBULIN UniProtKB/TrEMBL
PROSITE TUBULIN UniProtKB/TrEMBL
SMART Tubulin UniProtKB/TrEMBL
  Tubulin_C UniProtKB/TrEMBL
Superfamily-SCOP Tubulin C-terminal domain-like UniProtKB/TrEMBL
  Tubulin nucleotide-binding domain-like UniProtKB/TrEMBL
UniProt G5AKJ8 ENTREZGENE, UniProtKB/TrEMBL