LOC101705441 (neutrophil elastase-like) - Rat Genome Database

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Gene: LOC101705441 (neutrophil elastase-like) Heterocephalus glaber
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Symbol: LOC101705441
Name: neutrophil elastase-like
RGD ID: 18916132
Description: ENCODES a protein that exhibits cytokine binding (inferred); endopeptidase activity (inferred); heparin binding (inferred); INVOLVED IN acute inflammatory response to antigenic stimulus (inferred); biosynthetic process of antibacterial peptides active against Gram-negative bacteria (inferred); defense response to bacterium (inferred); FOUND IN cell surface (inferred); cytoplasm (inferred); extracellular space (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462515812,527 - 15,343 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_004875530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01109896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_004875530   ⟹   XP_004875587
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462515812,527 - 15,343 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004875587 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000000052
  ENSHGLP00000038578
  ENSHGLP00100058060
RefSeq Acc Id: XP_004875587   ⟸   XM_004875530
- UniProtKB: G5C5X4 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000000079 ENTREZGENE
  ENSHGLG00000038657 UniProtKB/TrEMBL
  ENSHGLG00100012716 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000000080 ENTREZGENE
  ENSHGLT00000047103 UniProtKB/TrEMBL
  ENSHGLT00100086464 UniProtKB/TrEMBL
Gene3D-CATH 2.40.10.10 UniProtKB/TrEMBL
InterPro Peptidase_S1_Elastase_sf UniProtKB/TrEMBL
  Peptidase_S1_PA UniProtKB/TrEMBL
  Peptidase_S1_PA_chymotrypsin UniProtKB/TrEMBL
  Peptidase_S1A UniProtKB/TrEMBL
  Trypsin_dom UniProtKB/TrEMBL
  TRYPSIN_HIS UniProtKB/TrEMBL
  TRYPSIN_SER UniProtKB/TrEMBL
KEGG Report hgl:101705441 UniProtKB/TrEMBL
  hgl:101715199 UniProtKB/TrEMBL
NCBI Gene LOC101705441 ENTREZGENE
PANTHER CHYMOTRYPSIN-LIKE ELASTASE FAMILY MEMBER UniProtKB/TrEMBL
  NEUTROPHIL ELASTASE UniProtKB/TrEMBL
Pfam Trypsin UniProtKB/TrEMBL
PRINTS CHYMOTRYPSIN UniProtKB/TrEMBL
PROSITE TRYPSIN_DOM UniProtKB/TrEMBL
  TRYPSIN_HIS UniProtKB/TrEMBL
  TRYPSIN_SER UniProtKB/TrEMBL
SMART Tryp_SPc UniProtKB/TrEMBL
Superfamily-SCOP SSF50494 UniProtKB/TrEMBL
UniProt G5C5X4 ENTREZGENE, UniProtKB/TrEMBL