Zfp92 (ZFP92 zinc finger protein)

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Gene: Zfp92 (ZFP92 zinc finger protein) Heterocephalus glaber

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Symbol:

Zfp92

Name:

ZFP92 zinc finger protein

RGD ID:

18906510

Description:

ASSOCIATED WITH adrenoleukodystrophy (ortholog); autistic disorder (ortholog); autosomal hemophilia A (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

zinc finger protein 92 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624946	170,620 - 173,765 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624946	165,358 - 177,243 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

adrenoleukodystrophy (ISO)

autistic disorder (ISO)

autosomal hemophilia A (ISO)

Barth syndrome (ISO)

cerebral creatine deficiency syndrome 1 (ISO)

dyskeratosis congenita (ISO)

Emery-Dreifuss muscular dystrophy (ISO)

factor VIII deficiency (ISO)

favism (ISO)

paraplegia (ISO)

periventricular nodular heterotopia (ISO)

severe congenital encephalopathy due to MECP2 mutation (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Zfp92
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624946	170,620 - 173,765 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624946	165,358 - 177,243 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

ZFP92
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	153,411,472 - 153,426,481 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	153,411,472 - 153,426,481 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	152,676,930 - 152,691,939 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	152,329,775 - 152,340,280 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	X	152,917,504 - 152,920,809 (+)	NCBI		Celera
Cytogenetic Map	X	q28	NCBI
HuRef	X	141,343,130 - 141,346,435 (+)	NCBI		HuRef
CHM1_1	X	152,558,208 - 152,561,513 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	X	151,685,065 - 151,700,072 (+)	NCBI		T2T-CHM13v2.0

Zfp92
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	72,454,555 - 72,473,980 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	72,454,702 - 72,471,991 (+)	Ensembl		GRCm39 Ensembl
GRCm38	X	73,410,949 - 73,428,382 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	73,411,096 - 73,428,385 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	70,656,442 - 70,672,326 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	69,663,823 - 69,679,707 (+)	NCBI		MGSCv36	mm8
Celera	X	64,664,943 - 64,680,827 (+)	NCBI		Celera
Cytogenetic Map	X	A7.3	NCBI
cM Map	X	37.31	NCBI

Zfp92
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	156,268,220 - 156,293,790 (+)	NCBI		GRCr8
mRatBN7.2	X	151,116,794 - 151,142,451 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	151,117,102 - 151,143,177 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	X	157,389,693 - 157,414,777 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	157,384,608 - 157,392,054 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	153,137,264 - 153,182,382 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	1	136,751,024 - 136,793,602 (-)	NCBI		Celera
Cytogenetic Map	X	q37	NCBI

Zfp92
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955580	190,538 - 193,967 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955580	185,250 - 197,329 (+)	NCBI	ChiLan1.0	ChiLan1.0

ZFP92
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	153,451,673 - 153,466,814 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	153,455,272 - 153,470,418 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	142,961,821 - 142,976,962 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	152,848,217 - 152,863,236 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	152,848,217 - 152,863,236 (+)	Ensembl	panpan1.1		panPan2

ZFP92
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	121,237,905 - 121,248,856 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	121,237,827 - 121,248,862 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	106,568,992 - 106,579,831 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	124,379,151 - 124,390,019 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	124,378,809 - 124,392,078 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	120,150,604 - 120,161,442 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	122,665,713 - 122,676,563 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	122,427,790 - 122,438,631 (+)	NCBI		UU_Cfam_GSD_1.0

Zfp92
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	118,556,754 - 118,571,598 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936809	301,482 - 356,094 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936809	294,114 - 309,368 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZFP92
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	124,216,324 - 124,224,778 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	124,215,906 - 124,227,853 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	141,779,261 - 141,791,209 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ZFP92
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	127,844,834 - 127,858,722 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	127,851,738 - 127,859,858 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666065	65,706,587 - 65,721,565 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_004875027	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021252331	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AHKG01106362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSHGLT00000025142 ⟹ ENSHGLP00000024920

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla_female_1.0 Ensembl	NW_004624946	170,620 - 173,765 (+)	Ensembl

RefSeq Acc Id:

XM_004875027 ⟹ XP_004875084

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624946	165,358 - 177,243 (+)	NCBI

RefSeq Acc Id:

XM_021252331 ⟹ XP_021107990

Type:

CODING

Position:

Naked Mole-Rat Assembly	Chr	Position (strand)	Source
HetGla 1.0	NW_004624946	165,358 - 177,243 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_004875084	(Get FASTA)	NCBI Sequence Viewer
	XP_021107990	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_004875084 ⟸ XM_004875027
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_021107990 ⟸ XM_021252331
- Peptide Label:	isoform X2

Ensembl Acc Id:

ENSHGLP00000024920 ⟸ ENSHGLT00000025142

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSHGLG00000017759	Ensembl
NCBI Gene	Zfp92	ENTREZGENE
UniProt	A0AAX6QJH5_HETGA	UniProtKB/TrEMBL
	A0AAX6SHT7_HETGA	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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