LOC101703210 (IST1 homolog) - Rat Genome Database

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Gene: LOC101703210 (IST1 homolog) Heterocephalus glaber
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Symbol: LOC101703210 (Ensembl: IST1)
Name: IST1 homolog
RGD ID: 18901401
Description: ENCODES a protein that exhibits MIT domain binding (inferred); protein domain specific binding (inferred); protein-containing complex binding (inferred); INVOLVED IN cell division (inferred); collateral sprouting (inferred); cytoskeleton-dependent cytokinesis (inferred); FOUND IN centrosome (inferred); chromatin (inferred); cytosol (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: increased sodium tolerance 1 homolog; Ist1; IST1-like protein
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474614,159,262 - 14,190,931 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474614,159,219 - 14,192,493 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSHGLT00000015023   ⟹   ENSHGLP00000014875
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla_female_1.0 EnsemblNW_00462474614,159,262 - 14,190,931 (+)Ensembl
RefSeq Acc Id: XM_004842912   ⟹   XP_004842969
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462474614,159,219 - 14,192,493 (+)NCBI
RefSeq Acc Id: XM_004842913   ⟹   XP_004842970
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462474614,159,219 - 14,192,493 (+)NCBI
RefSeq Acc Id: XM_004842914   ⟹   XP_004842971
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462474614,159,219 - 14,192,493 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004842969 (Get FASTA)   NCBI Sequence Viewer  
  XP_004842970 (Get FASTA)   NCBI Sequence Viewer  
  XP_004842971 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB10949 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000014875
GenBank Protein JAO00588 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_004842969   ⟸   XM_004842912
- Peptide Label: isoform X1
- UniProtKB: A0A0P6JAS5 (UniProtKB/TrEMBL),   G5BNT8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004842970   ⟸   XM_004842913
- Peptide Label: isoform X2
- UniProtKB: G5BNT8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004842971   ⟸   XM_004842914
- Peptide Label: isoform X3
- UniProtKB: G5BNT8 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSHGLP00000014875   ⟸   ENSHGLT00000015023


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000010625 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00000015023 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH 1.20.1260.60 UniProtKB/TrEMBL
InterPro Ist1 UniProtKB/TrEMBL
  IST1-like UniProtKB/TrEMBL
KEGG Report hgl:101703210 UniProtKB/TrEMBL
NCBI Gene LOC101703210 ENTREZGENE
PANTHER IST1 HOMOLOG UniProtKB/TrEMBL
  PTHR12161 UniProtKB/TrEMBL
Pfam Ist1 UniProtKB/TrEMBL
UniProt A0A0P6JAS5 ENTREZGENE, UniProtKB/TrEMBL
  A0AAX6P3W5_HETGA UniProtKB/TrEMBL
  A0AAX6P3W6_HETGA UniProtKB/TrEMBL
  G5BNT8 ENTREZGENE, UniProtKB/TrEMBL