STPG2 (sperm tail PG-rich repeat containing 2) - Rat Genome Database

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Gene: STPG2 (sperm tail PG-rich repeat containing 2) Chlorocebus sabaeus
Analyze
Symbol: STPG2
Name: sperm tail PG-rich repeat containing 2
RGD ID: 18714968
Description: ASSOCIATED WITH genetic disease (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: sperm-tail PG-rich repeat-containing protein 2
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1745,648,743 - 46,376,385 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603724,041,301 - 24,714,778 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

Genomics

Comparative Map Data
STPG2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1745,648,743 - 46,376,385 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603724,041,301 - 24,714,778 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
STPG2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38497,441,249 - 98,143,476 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl497,184,093 - 98,143,476 (-)EnsemblGRCh38hg38GRCh38
GRCh37498,480,023 - 99,064,627 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36498,699,058 - 99,283,414 (-)NCBINCBI36Build 36hg18NCBI36
Celera495,774,867 - 96,359,061 (-)NCBICelera
Cytogenetic Map4q22.3-q23NCBI
HuRef494,217,293 - 94,801,714 (-)NCBIHuRef
CHM1_1498,456,801 - 99,041,326 (-)NCBICHM1_1
T2T-CHM13v2.04100,756,071 - 101,458,472 (-)NCBIT2T-CHM13v2.0
Stpg2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393138,910,953 - 139,415,185 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3138,911,455 - 139,416,060 (+)EnsemblGRCm39 Ensembl
GRCm383139,205,893 - 139,710,299 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3139,205,694 - 139,710,299 (+)EnsemblGRCm38mm10GRCm38
MGSCv373138,868,857 - 139,373,263 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363139,143,280 - 139,647,686 (+)NCBIMGSCv36mm8
Celera3145,638,723 - 146,129,093 (+)NCBICelera
Cytogenetic Map3H1NCBI
cM Map364.68NCBI
Stpg2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82230,434,014 - 230,958,932 (+)NCBIGRCr8
mRatBN7.22227,764,266 - 228,285,664 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2227,764,353 - 228,285,663 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2235,502,910 - 236,028,975 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02233,402,677 - 233,928,748 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02228,267,285 - 228,793,353 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02244,521,604 - 245,044,919 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2244,521,699 - 245,044,918 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02263,279,612 - 263,408,992 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.02263,050,120 - 263,176,297 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.02263,571,889 - 263,576,774 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42236,793,487 - 237,340,054 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera2219,909,155 - 220,399,541 (+)NCBICelera
Cytogenetic Map2q44NCBI
STPG2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2395,500,927 - 96,219,482 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1495,778,538 - 96,497,062 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0489,564,946 - 90,554,537 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14100,256,954 - 101,219,362 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4100,622,070 - 101,219,065 (-)Ensemblpanpan1.1panPan2
STPG2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13219,897,256 - 20,430,716 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3219,897,256 - 20,431,898 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3221,505,411 - 22,041,581 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03220,076,573 - 20,614,414 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3220,117,245 - 20,614,441 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13220,045,452 - 20,583,673 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03219,870,374 - 20,408,281 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03219,488,773 - 20,020,578 (+)NCBIUU_Cfam_GSD_1.0
Stpg2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530121,297,834 - 21,803,579 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936717515,890 - 804,003 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936717515,890 - 1,016,932 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
STPG2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl8122,115,074 - 122,441,584 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.18122,115,046 - 122,442,122 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28131,181,377 - 131,222,749 (+)NCBISscrofa10.2Sscrofa10.2susScr3
Stpg2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248165,644,540 - 5,652,289 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


RefSeq Acc Id: XM_007999315   ⟹   XP_007997506
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1745,648,743 - 46,285,564 (-)NCBI
Vero_WHO_p1.0NW_02366603724,673,937 - 24,714,778 (-)NCBI
Sequence:
RefSeq Acc Id: XR_005237783
Type: NON-CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366603724,041,301 - 24,714,423 (-)NCBI
Protein Sequences
Protein RefSeqs XP_007997506 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_007997506   ⟸   XM_007999315


Additional Information

Database Acc Id Source(s)
NCBI Gene STPG2 ENTREZGENE