LOC103248732 (olfactory receptor 8B4) - Rat Genome Database

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Gene: LOC103248732 (olfactory receptor 8B4) Chlorocebus sabaeus
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Symbol: LOC103248732
Name: olfactory receptor 8B4
RGD ID: 18686296
Description: ENCODES a protein that exhibits G protein-coupled receptor activity (inferred); olfactory receptor activity (inferred); INVOLVED IN detection of chemical stimulus involved in sensory perception of smell (inferred); G protein-coupled receptor signaling pathway (inferred); sensory perception of smell (inferred); ASSOCIATED WITH chromosome 11 partial duplication syndrome (ortholog); Dwarfism (ortholog); holoprosencephaly 11 (ortholog); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Pig
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11115,566,649 - 115,572,103 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604310,547,250 - 10,548,643 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
LOC103248732
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11115,566,649 - 115,572,103 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604310,547,250 - 10,548,643 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
OR8B4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811124,423,942 - 124,424,871 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11124,423,942 - 124,424,871 (-)EnsemblGRCh38hg38GRCh38
GRCh3711124,293,838 - 124,294,767 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3611123,799,048 - 123,799,977 (-)NCBINCBI36Build 36hg18NCBI36
Build 3411123,799,047 - 123,799,977NCBI
Celera11121,453,838 - 121,454,767 (-)NCBICelera
Cytogenetic Map11q24.2NCBI
HuRef11120,235,905 - 120,236,834 (-)NCBIHuRef
CHM1_111124,179,974 - 124,180,903 (-)NCBICHM1_1
T2T-CHM13v2.011124,452,615 - 124,453,544 (-)NCBIT2T-CHM13v2.0
Or8b4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39937,829,844 - 37,830,908 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl937,829,136 - 37,833,770 (+)EnsemblGRCm39 Ensembl
GRCm38937,918,548 - 37,919,612 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl937,917,840 - 37,922,474 (+)EnsemblGRCm38mm10GRCm38
MGSCv37937,726,133 - 37,727,197 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36937,668,315 - 37,669,259 (+)NCBIMGSCv36mm8
Celera935,141,282 - 35,142,346 (+)NCBICelera
Cytogenetic Map9A4NCBI
cM Map920.82NCBI
Or8b4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8845,908,892 - 45,909,821 (+)NCBIGRCr8
mRatBN7.2837,720,158 - 37,721,087 (+)NCBImRatBN7.2mRatBN7.2
UTH_Rnor_SHR_Utx841,671,490 - 41,672,419 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0839,954,526 - 39,955,455 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0837,817,393 - 37,818,322 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0840,410,700 - 40,414,063 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl840,410,604 - 40,411,648 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0840,408,940 - 40,409,869 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4839,306,355 - 39,307,284 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1839,315,120 - 39,316,050 (+)NCBI
Celera836,736,626 - 36,737,555 (-)NCBICelera
Cytogenetic Map8q22NCBI
LOC100994056
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v29125,119,230 - 125,120,162 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan111126,224,198 - 126,225,130 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v011119,250,801 - 119,251,733 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111123,166,677 - 123,167,609 (-)NCBIpanpan1.1PanPan1.1panPan2
OR8B4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.159,950,666 - 9,951,595 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha59,995,701 - 9,996,630 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.059,888,661 - 9,891,511 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.159,962,323 - 9,963,252 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.059,932,997 - 9,933,926 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.059,969,810 - 9,970,739 (+)NCBIUU_Cfam_GSD_1.0
LOC100523744
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl951,624,333 - 51,625,280 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1951,624,333 - 51,626,022 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2957,138,434 - 57,139,381 (-)NCBISscrofa10.2Sscrofa10.2susScr3

Variants

.
Variants in LOC103248732
139 total Variants

Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_038004916   ⟹   XP_037860844
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366604310,547,250 - 10,548,643 (+)NCBI
Protein Sequences
Protein RefSeqs XP_037860844 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCSAP00000015653.1
RefSeq Acc Id: XP_037860844   ⟸   XM_038004916
- UniProtKB: A0A0D9S464 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000002388 UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000000405.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
NCBI Gene LOC103248732 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A0D9S464 ENTREZGENE, UniProtKB/TrEMBL