AC069547.2 (novel transcript, antisense to SGMS1) - Rat Genome Database

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Gene: AC069547.2 (novel transcript, antisense to SGMS1) Homo sapiens
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Symbol: AC069547.2
Name: novel transcript, antisense to SGMS1
RGD ID: 16571516
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1050,325,697 - 50,341,585 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:392
Count of miRNA genes:325
Interacting mature miRNAs:348
Transcripts:ENST00000596442
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences

Ensembl Acc Id: ENST00000657992
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1050,325,652 - 50,342,239 (+)Ensembl
Ensembl Acc Id: ENST00000795389
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1050,325,686 - 50,358,180 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC069547.2 COSMIC
Ensembl Genes ENSG00000286401 Ensembl
GTEx ENSG00000286401 GTEx
Human Proteome Map AC069547.2 Human Proteome Map