AC012306.2 (novel transcript) - Rat Genome Database

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Gene: AC012306.2 (novel transcript) Homo sapiens
Analyze
Symbol: AC012306.2
Name: novel transcript
RGD ID: 16566492
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl2127,886,556 - 127,887,185 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:184
Count of miRNA genes:173
Interacting mature miRNAs:183
Transcripts:ENST00000423267, ENST00000609350
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
1204 2432 2788 2245 4942 1723 2345 4 622 1869 464 2268 7199 6373 52 3708 846 1731 1612 171

Sequence

Nucleotide Sequences

Ensembl Acc Id: ENST00000609350
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2127,886,556 - 127,887,185 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC012306.2 COSMIC
Ensembl Genes ENSG00000272667 Ensembl
GTEx ENSG00000272667 GTEx
Human Proteome Map AC012306.2 Human Proteome Map
RNAcentral URS00001361FD RNACentral