AL132656.3 (novel transcript) - Rat Genome Database

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Gene: AL132656.3 (novel transcript) Homo sapiens
Analyze
Symbol: AL132656.3
Name: novel transcript
RGD ID: 16566420
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1079,663,192 - 79,664,786 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:180
Count of miRNA genes:172
Interacting mature miRNAs:180
Transcripts:ENST00000606384
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
1061 2027 2244 1696 3588 1311 1939 4 395 1023 243 2152 4826 4651 50 2480 685 1511 1463 164

Sequence

Nucleotide Sequences

Ensembl Acc Id: ENST00000606384
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1079,663,192 - 79,664,786 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AL132656.3 COSMIC
Ensembl Genes ENSG00000272489 Ensembl
GTEx ENSG00000272489 GTEx
Human Proteome Map AL132656.3 Human Proteome Map
RNAcentral URS000058E9FC RNACentral