AC005324.4 (novel transcript) - Rat Genome Database

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Gene: AC005324.4 (novel transcript) Homo sapiens
Analyze
Symbol: AC005324.4
Name: novel transcript
RGD ID: 16564210
Description:
Type: lncrna
Previously known as: AC005324.5
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1715,651,590 - 15,654,489 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:197
Count of miRNA genes:191
Interacting mature miRNAs:195
Transcripts:ENST00000584540
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
431 1336 1246 727 3679 1172 1470 2 390 1049 309 1483 3553 2854 34 2481 604 1239 975 93

Sequence

Nucleotide Sequences

Ensembl Acc Id: ENST00000584540
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1715,651,590 - 15,654,489 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC005324.4 COSMIC
Ensembl Genes ENSG00000266261 Ensembl
GTEx ENSG00000266261 GTEx
Human Proteome Map AC005324.4 Human Proteome Map
RNAcentral URS000041E20B RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-12-03 AC005324.4  novel transcript  AC005324.5  novel transcript  Symbol and/or name change 19259462 PROVISIONAL