AL355096.1 (novel transcript) - Rat Genome Database

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Gene: AL355096.1 (novel transcript) Homo sapiens
Analyze
Symbol: AL355096.1
Name: novel transcript
RGD ID: 16561688
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl14101,332,511 - 101,335,497 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:231
Count of miRNA genes:223
Interacting mature miRNAs:228
Transcripts:ENST00000553561
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
349 610 565 266 1276 632 977 3 453 102 421 376 1544 1246 1 1295 388 936 346 34

Sequence

Nucleotide Sequences

Ensembl Acc Id: ENST00000553561
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl14101,332,509 - 101,335,527 (-)Ensembl
Ensembl Acc Id: ENST00000669400
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl14101,332,509 - 101,335,497 (-)Ensembl
Ensembl Acc Id: ENST00000691554
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl14101,332,509 - 101,335,525 (-)Ensembl
Ensembl Acc Id: ENST00000701770
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl14101,332,536 - 101,335,493 (-)Ensembl
Ensembl Acc Id: ENST00000701839
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl14101,324,167 - 101,335,493 (-)Ensembl
Ensembl Acc Id: ENST00000725776
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl14101,308,957 - 101,334,894 (-)Ensembl
Ensembl Acc Id: ENST00000725777
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl14101,324,162 - 101,334,897 (-)Ensembl
Ensembl Acc Id: ENST00000725778
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl14101,324,164 - 101,334,897 (-)Ensembl
Ensembl Acc Id: ENST00000725779
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl14101,326,920 - 101,335,484 (-)Ensembl
Ensembl Acc Id: ENST00000725780
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl14101,332,511 - 101,335,515 (-)Ensembl
Ensembl Acc Id: ENST00000725781
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl14101,332,516 - 101,335,497 (-)Ensembl
Ensembl Acc Id: ENST00000725782
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl14101,332,509 - 101,334,939 (-)Ensembl
Ensembl Acc Id: ENST00000725783
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl14101,332,509 - 101,334,920 (-)Ensembl
Ensembl Acc Id: ENST00000725784
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl14101,332,509 - 101,334,914 (-)Ensembl
Ensembl Acc Id: ENST00000725785
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl14101,332,517 - 101,334,905 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AL355096.1 COSMIC
Ensembl Genes ENSG00000258460 Ensembl
GTEx ENSG00000258460 GTEx
Human Proteome Map AL355096.1 Human Proteome Map
RNAcentral URS0000EEDB8B RNACentral
  URS00022B90DA RNACentral
  URS00025E684F RNACentral
  URS00025E6A3F RNACentral
  URS00025EBA99 RNACentral