AP003721.3 (novel transcript) - Rat Genome Database

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Gene: AP003721.3 (novel transcript) Homo sapiens
Analyze
Symbol: AP003721.3
Name: novel transcript
RGD ID: 16561157
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1160,913,166 - 60,914,052 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:305
Count of miRNA genes:267
Interacting mature miRNAs:277
Transcripts:ENST00000543275
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
223 492 347 297 1717 543 768 3 138 357 94 374 1384 1184 36 1481 310 797 527 46

Sequence

Nucleotide Sequences

Ensembl Acc Id: ENST00000543275
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1160,913,166 - 60,914,095 (-)Ensembl
Ensembl Acc Id: ENST00000725383
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1160,913,166 - 60,914,065 (-)Ensembl
Ensembl Acc Id: ENST00000725384
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1160,913,166 - 60,914,065 (-)Ensembl
Ensembl Acc Id: ENST00000725385
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1160,913,166 - 60,914,063 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AP003721.3 COSMIC
Ensembl Genes ENSG00000256944 Ensembl
GTEx ENSG00000256944 GTEx
Human Proteome Map AP003721.3 Human Proteome Map