AC136475.1 (novel transcript, antisense to IFITM3) - Rat Genome Database

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Gene: AC136475.1 (novel transcript, antisense to IFITM3) Homo sapiens
Analyze
Symbol: AC136475.1
Name: novel transcript, antisense to IFITM3
RGD ID: 16559340
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl11318,640 - 325,631 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:463
Count of miRNA genes:386
Interacting mature miRNAs:419
Transcripts:ENST00000508004, ENST00000602429, ENST00000602756
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
1204 2432 2781 2245 4941 1722 2343 4 621 1940 463 2268 7263 6444 52 3707 847 1731 1611 170

Sequence

Nucleotide Sequences

Ensembl Acc Id: ENST00000508004
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11318,640 - 319,615 (+)Ensembl
Ensembl Acc Id: ENST00000524824
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11327,304 - 330,195 (+)Ensembl
Ensembl Acc Id: ENST00000531076
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11327,304 - 327,963 (+)Ensembl
Ensembl Acc Id: ENST00000534483
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11327,171 - 329,453 (+)Ensembl
Ensembl Acc Id: ENST00000602429
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11318,632 - 325,644 (+)Ensembl
Ensembl Acc Id: ENST00000602756
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11318,672 - 325,069 (+)Ensembl
Ensembl Acc Id: ENST00000688089
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11329,709 - 330,195 (+)Ensembl
Ensembl Acc Id: ENST00000717735
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11318,582 - 330,206 (+)Ensembl
Ensembl Acc Id: ENST00000717736
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11318,600 - 330,195 (+)Ensembl
Ensembl Acc Id: ENST00000717737
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11318,611 - 330,195 (+)Ensembl
Ensembl Acc Id: ENST00000717738
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11318,668 - 330,195 (+)Ensembl
Ensembl Acc Id: ENST00000755701
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11318,611 - 330,195 (+)Ensembl
Ensembl Acc Id: ENST00000755702
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11318,626 - 325,643 (+)Ensembl
Ensembl Acc Id: ENST00000755703
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11327,236 - 330,195 (+)Ensembl
Ensembl Acc Id: ENST00000755704
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11327,255 - 330,195 (+)Ensembl
Ensembl Acc Id: ENST00000755705
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11327,269 - 330,199 (+)Ensembl
Ensembl Acc Id: ENST00000755706
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11327,303 - 330,195 (+)Ensembl
Ensembl Acc Id: ENST00000755707
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11327,322 - 330,195 (+)Ensembl
Ensembl Acc Id: ENST00000755708
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11327,356 - 330,195 (+)Ensembl
Ensembl Acc Id: ENST00000755709
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11327,447 - 330,195 (+)Ensembl
Ensembl Acc Id: ENST00000755710
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11318,594 - 319,731 (+)Ensembl
Ensembl Acc Id: ENST00000755711
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl11329,709 - 330,195 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC136475.1 COSMIC
Ensembl Genes ENSG00000251661 Ensembl
GTEx ENSG00000251661 GTEx
Human Proteome Map AC136475.1 Human Proteome Map