AC105345.2 (novel transcript) - Rat Genome Database

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Gene: AC105345.2 (novel transcript) Homo sapiens
Analyze
Symbol: AC105345.2
Name: novel transcript
RGD ID: 16559157
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl48,453,410 - 8,454,942 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:351
Count of miRNA genes:342
Interacting mature miRNAs:347
Transcripts:ENST00000515186
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
608 902 1228 898 2033 906 1293 4 292 594 192 1351 2635 2651 19 1282 471 1076 950 106

Sequence

Nucleotide Sequences

Ensembl Acc Id: ENST00000515186
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl48,453,410 - 8,454,942 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC105345.2 COSMIC
Ensembl Genes ENSG00000251186 Ensembl
GTEx ENSG00000251186 GTEx
Human Proteome Map AC105345.2 Human Proteome Map
RNAcentral URS000031A7EF RNACentral