AC020893.1 (calcium binding protein P22 (CHP) pseudogene) - Rat Genome Database

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Gene: AC020893.1 (calcium binding protein P22 (CHP) pseudogene) Homo sapiens
Analyze
Symbol: AC020893.1
Name: calcium binding protein P22 (CHP) pseudogene
RGD ID: 16558325
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl573,020,700 - 73,021,279 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:167
Count of miRNA genes:161
Interacting mature miRNAs:162
Transcripts:ENST00000502452
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
364 578 911 565 1277 481 730 1 164 398 103 839 1765 1625 1 795 239 495 537 62

Sequence

Nucleotide Sequences

Ensembl Acc Id: ENST00000502452
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl573,020,700 - 73,021,279 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC020893.1 COSMIC
Ensembl Genes ENSG00000248930 Ensembl
GTEx ENSG00000248930 GTEx
Human Proteome Map AC020893.1 Human Proteome Map