AC093772.1 (novel transcript) - Rat Genome Database

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Gene: AC093772.1 (novel transcript) Homo sapiens
Analyze
Symbol: AC093772.1
Name: novel transcript
RGD ID: 16558166
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl4127,094,410 - 127,470,569 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:264
Count of miRNA genes:246
Interacting mature miRNAs:250
Transcripts:ENST00000504050, ENST00000509671, ENST00000513519
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
916 1005 898 948 1945 899 1421 100 249 55 1032 2331 2611 19 1348 431 885 1186 47

Sequence

Nucleotide Sequences

Ensembl Acc Id: ENST00000504050
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4127,097,098 - 127,470,582 (-)Ensembl
Ensembl Acc Id: ENST00000509671
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4127,401,726 - 127,470,569 (-)Ensembl
Ensembl Acc Id: ENST00000513519
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4127,094,410 - 127,178,970 (-)Ensembl
Ensembl Acc Id: ENST00000661442
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4127,194,353 - 127,470,547 (-)Ensembl
Ensembl Acc Id: ENST00000667124
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4127,136,585 - 127,470,579 (-)Ensembl
Ensembl Acc Id: ENST00000669239
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4127,228,519 - 127,352,379 (-)Ensembl
Ensembl Acc Id: ENST00000716554
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4127,097,089 - 127,352,401 (-)Ensembl
Ensembl Acc Id: ENST00000746667
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4127,097,091 - 127,352,379 (-)Ensembl
Ensembl Acc Id: ENST00000828147
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4127,401,726 - 127,470,632 (-)Ensembl
Ensembl Acc Id: ENST00000828148
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4127,401,726 - 127,470,606 (-)Ensembl
Ensembl Acc Id: ENST00000828149
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4127,401,726 - 127,470,604 (-)Ensembl
Ensembl Acc Id: ENST00000828150
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4127,401,726 - 127,470,603 (-)Ensembl
Ensembl Acc Id: ENST00000828151
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4127,401,726 - 127,470,587 (-)Ensembl
Ensembl Acc Id: ENST00000828152
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4127,401,726 - 127,470,574 (-)Ensembl
Ensembl Acc Id: ENST00000828153
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4127,401,726 - 127,470,574 (-)Ensembl
Ensembl Acc Id: ENST00000828154
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4127,401,726 - 127,470,557 (-)Ensembl
Ensembl Acc Id: ENST00000828155
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4127,401,726 - 127,470,554 (-)Ensembl
Ensembl Acc Id: ENST00000828156
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4127,401,726 - 127,470,549 (-)Ensembl
Ensembl Acc Id: ENST00000828157
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4127,401,726 - 127,470,538 (-)Ensembl
Ensembl Acc Id: ENST00000828158
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl4127,401,726 - 127,464,608 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC093772.1 COSMIC
Ensembl Genes ENSG00000248491 Ensembl
GTEx ENSG00000248491 GTEx
Human Proteome Map AC093772.1 Human Proteome Map