AC079804.1 (novel pseudogene) - Rat Genome Database

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Gene: AC079804.1 (novel pseudogene) Homo sapiens
Analyze
Symbol: AC079804.1
Name: novel pseudogene
RGD ID: 16557517
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl76,924,078 - 6,924,513 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:389
Count of miRNA genes:317
Interacting mature miRNAs:348
Transcripts:ENST00000408084, ENST00000461922
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
15 179 74 81 399 119 361 2 48 164 47 276 559 315 46 152 145 265 295 9

Sequence

Nucleotide Sequences

Ensembl Acc Id: ENST00000461922
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl76,924,078 - 6,924,513 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC079804.1 COSMIC
Ensembl Genes ENSG00000241539 Ensembl
GTEx ENSG00000241539 GTEx
Human Proteome Map AC079804.1 Human Proteome Map