AL031183.1 (novel pseudogene) - Rat Genome Database

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Gene: AL031183.1 (novel pseudogene) Homo sapiens
Analyze
Symbol: AL031183.1
Name: novel pseudogene
RGD ID: 16556197
Description:
Type: processed_pseudogene
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 EnsemblX113,347,413 - 113,347,619 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:154
Count of miRNA genes:149
Interacting mature miRNAs:151
Transcripts:ENST00000457667
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
9 20 36 10 121 18 29 3 33 2 54 71 55 2 103 18 37 24 2

Sequence

Nucleotide Sequences

Ensembl Acc Id: ENST00000457667
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblX113,347,413 - 113,347,619 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AL031183.1 COSMIC
Ensembl Genes ENSG00000235329 Ensembl
GTEx ENSG00000235329 GTEx
Human Proteome Map AL031183.1 Human Proteome Map