AL445070.1 (novel transcript) - Rat Genome Database

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Gene: AL445070.1 (novel transcript) Homo sapiens
Analyze
Symbol: AL445070.1
Name: novel transcript
RGD ID: 16554633
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl107,533,207 - 7,536,565 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:186
Count of miRNA genes:186
Interacting mature miRNAs:186
Transcripts:ENST00000414631
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
281 591 554 274 509 296 358 63 83 48 321 794 855 4 701 183 530 253 15

Sequence

Nucleotide Sequences

Ensembl Acc Id: ENST00000414631
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl107,533,207 - 7,536,565 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AL445070.1 COSMIC
Ensembl Genes ENSG00000230121 Ensembl
GTEx ENSG00000230121 GTEx
Human Proteome Map AL445070.1 Human Proteome Map