AC035139.1 (novel transcript) - Rat Genome Database

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Gene: AC035139.1 (novel transcript) Homo sapiens
Analyze
Symbol: AC035139.1
Name: novel transcript
RGD ID: 16554095
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl1048,878,022 - 48,878,649 (+)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:244
Count of miRNA genes:238
Interacting mature miRNAs:239
Transcripts:ENST00000423256
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
580 680 813 594 1545 607 1143 262 1662 173 866 2971 2992 6 1254 307 757 888 90

Sequence

Nucleotide Sequences

Ensembl Acc Id: ENST00000423256
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1048,878,022 - 48,878,649 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC035139.1 COSMIC
Ensembl Genes ENSG00000228403 Ensembl
GTEx ENSG00000228403 GTEx
Human Proteome Map AC035139.1 Human Proteome Map
RNAcentral URS00000F9883 RNACentral