AC083900.1 (novel transcript) - Rat Genome Database

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Gene: AC083900.1 (novel transcript) Homo sapiens
Analyze
Symbol: AC083900.1
Name: novel transcript
RGD ID: 16553090
Description:
Type: lncrna
Latest Assembly: GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p14 Ensembl2207,868,582 - 207,869,915 (-)EnsemblGRCh38hg38GRCh38
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:105
Count of miRNA genes:93
Interacting mature miRNAs:101
Transcripts:ENST00000421964
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
1025 1723 1910 1229 2895 1546 2084 4 588 1559 456 1976 5132 4566 48 1735 681 1262 1411 140

Sequence

Nucleotide Sequences

Ensembl Acc Id: ENST00000421964
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2207,867,714 - 207,869,968 (-)Ensembl
Ensembl Acc Id: ENST00000811325
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2207,866,976 - 207,869,910 (-)Ensembl
Ensembl Acc Id: ENST00000811326
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2207,867,372 - 207,869,910 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AC083900.1 COSMIC
Ensembl Genes ENSG00000225111 Ensembl
GTEx ENSG00000225111 GTEx
Human Proteome Map AC083900.1 Human Proteome Map