Y_RNA (Y RNA) - Rat Genome Database
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Summary
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Genomics
miRNA Target Status (No longer
Expression
RNA-SEQ Expression
Sequence
Nucleotide Sequences
Reference Sequences
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External Database Links
Nomenclature History
Gene: Y_RNA (Y RNA) Homo sapiens
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Analyze
General
Array IDs
Symbol:
Y_RNA
Name:
Y RNA
RGD ID:
16551188
Description:
Type:
misc_rna
Previously known as:
AC002407.1
Latest Assembly:
GRCh38.p14 Ensembl - Human Genome Assembly GRCh38 Ensembl
Position:
Human Assembly
Chr
Position (strand)
Source
Genome Browsers
JBrowse
NCBI
UCSC
Ensembl
GRCh38.p14 Ensembl
X
134,142,228 - 134,142,340 (-)
Ensembl
GRCh38
hg38
GRCh38
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Annotation
Click to see Annotation Summary View
References
Genomics
.
miRNA Target Status (No longer updated)
Predicted Target Of
Summary Value
Count of predictions:
135
Count of miRNA genes:
129
Interacting mature miRNAs:
130
Transcripts:
ENST00000363702
Prediction methods:
Microtar, Miranda, Rnahybrid
Result types:
miRGate_prediction
The detailed report is available here:
Full Report
CSV
TAB
Printer
miRNA Target Status data imported from miRGate (
http://mirgate.bioinfo.cnio.es/
).
For more information about miRGate, see
PMID:25858286
or access the full paper
here
.
Expression
RNA-SEQ Expression
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
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adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
2
3
2
2
6
3
3
1
5
1
3
9
11
4
3
2
Too many to show, limit is 500. Download them if you would like to view them all.
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Sequence
Nucleotide Sequences
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All Rows
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All Rows
Reference Sequences
0 to 0 of 0 rows
3
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All Rows
Ensembl Acc Id:
ENST00000363702
Type:
CODING
Position:
Human Assembly
Chr
Position (strand)
Source
GRCh38.p14 Ensembl
X
134,142,228 - 134,142,340 (-)
Ensembl
0 to 0 of 0 rows
3
5
10
20
100
All Rows
Additional Information
External Database Links
1 to 5 of 5 rows
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All Rows
Database
Acc Id
Source(s)
COSMIC
Y_RNA
COSMIC
Ensembl Genes
ENSG00000200572
Ensembl
GTEx
ENSG00000200572
GTEx
Human Proteome Map
Y_RNA
Human Proteome Map
RNAcentral
URS0000693AA2
RNACentral
1 to 5 of 5 rows
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Nomenclature History
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2020-08-20
Y_RNA
Y RNA
AC002407.1
Symbol and/or name change
19259462
PROVISIONAL
2020-02-07
AC002407.1
Y_RNA
Y RNA
Symbol and/or name change
19259462
PROVISIONAL