7420700N18Rik (RIKEN cDNA 7420700N18 gene) - Rat Genome Database

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Gene: 7420700N18Rik (RIKEN cDNA 7420700N18 gene) Mus musculus
Analyze
Symbol: 7420700N18Rik
Name: RIKEN cDNA 7420700N18 gene
RGD ID: 1620742
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Previously known as: hypothetical protein LOC74517; uncharacterized protein LOC74517
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39831,857,777 - 31,872,467 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl831,868,841 - 31,872,467 (+)EnsemblGRCm39 Ensembl
GRCm38831,367,749 - 31,382,439 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl831,378,813 - 31,382,439 (+)EnsemblGRCm38mm10GRCm38
MGSCv37832,478,221 - 32,492,914 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36832,478,221 - 32,492,914 (+)NCBIMGSCv36mm8
Celera832,893,836 - 32,908,454 (+)NCBICelera
Cytogenetic Map8A3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073   PMID:17015433  


Genomics

Variants

.
Variants in 7420700N18Rik
635 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558870Eae36_mexperimental allergic encephalomyelitis susceptibility 36 (mouse)Not determined81477316071498244Mouse
1301298Pgia4_mproteoglycan induced arthritis 4 (mouse)Not determined81656937350569697Mouse
1300912Daq19_mdirectional asymmetry QTL 19 (mouse)Not determined81550657249506729Mouse
13524525Bodwtq7_mbody wweight QTL 7 (mouse)82824955647027681Mouse
11532713Sluc42_msusceptibility to lung cancer 42 (mouse)81344721035321225Mouse
1300603Cd8ts2_mCD8 T cell subset 2 (mouse)Not determined81945501853455150Mouse
1302173Vent1_mventricular size 1 (mouse)Not determined83183168634743564Mouse
1301532Scc8_mcolon tumor susceptibility 8 (mouse)Not determined8721249935110107Mouse
10412209Cypr7_mcytokine production 7 (mouse)Not determined8810320142103372Mouse
1301088Alcw6_malcohol withdrawal 6 (mouse)Not determined81550657249506729Mouse
1300906Ap8q_malcohol preference 8 QTL (mouse)Not determined8798418941984342Mouse
1301929Eae24_msusceptibility to experimental allergic encephalomyelitis 24 (mouse)Not determined8810320142103372Mouse
27226756Femd2_mfemur midshaft diameter 2, 5 week (mouse)8495000035067154Mouse
1301128Sluc20_msusceptibility to lung cancer 20 (mouse)Not determined8810320142103372Mouse
1301160Eae14_msusceptibility to experimental allergic encephalomyelitis 14 (mouse)Not determined81945501853455150Mouse
1301550Fembrs2_mfemur breaking strength 2 (mouse)Not determined81832109752321225Mouse
10043974Obq30_mobesity QTL 30 (mouse)Not determined82658332260583322Mouse


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000209524
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl831,868,841 - 31,872,467 (+)Ensembl
GRCm38.p6 Ensembl831,378,813 - 31,382,439 (+)Ensembl
RefSeq Acc Id: NR_046272
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39831,857,777 - 31,872,467 (+)NCBI
GRCm38831,367,749 - 31,382,439 (+)ENTREZGENE
Celera832,893,836 - 32,908,454 (+)ENTREZGENE
cM Map8 ENTREZGENE
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000109915 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000209524 ENTREZGENE
MGD MGI:1921767 ENTREZGENE
NCBI Gene 74517 ENTREZGENE
PhenoGen 7420700N18Rik PhenoGen
RNAcentral URS000075A28D RNACentral