Gm11507 (predicted gene 11507) - Rat Genome Database

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Gene: Gm11507 (predicted gene 11507) Mus musculus
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Symbol: Gm11507
Name: predicted gene 11507
RGD ID: 1613882
MGI Page MGI
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: Hr6bn
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391187,835,049 - 87,835,495 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1187,835,229 - 87,835,640 (+)EnsemblGRCm39 Ensembl
GRCm381187,944,223 - 87,944,669 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1187,944,403 - 87,944,814 (+)EnsemblGRCm38mm10GRCm38
MGSCv371187,757,725 - 87,758,171 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361188,014,131 - 88,014,577 (+)NCBIMGSCv36mm8
Celera1197,547,327 - 97,547,773 (+)NCBICelera
Cytogenetic Map11CNCBI
cM Map1152.32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm11507
2 total Variants

Predicted Target Of
Summary Value
Count of predictions:124
Count of miRNA genes:121
Interacting mature miRNAs:124
Transcripts:ENSMUST00000156462
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 54 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
27226783Tibl5_mtibia length 5, 5 week (mouse)1168190826101890826Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166733420100733652Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1558812Rafar_mretinoic acid induced forelimb autopod reduction (mouse)Not determined1170691198104691366Mouse
1300766Skull16_mskull morphology 16 (mouse)Not determined1181574481115574636Mouse
1301404Sbmd4_mspinal bone mineral density 4 (mouse)Not determined1172019649106019734Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
27226758Femd3_mfemur midshaft diameter 3, 5 week (mouse)1180890826101890826Mouse
14747003Mancz9_mmandible centroid size 9 (mouse)1185844911119844911Mouse
1301640Lore4_mloss of righting induced by ethanol 4 (mouse)Not determined1179156009107616472Mouse

1 to 10 of 54 rows






Ensembl Acc Id: ENSMUST00000156462
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1187,835,229 - 87,835,640 (+)Ensembl
GRCm38.p6 Ensembl1187,944,403 - 87,944,814 (+)Ensembl
GenBank Protein AAG27697 (Get FASTA)   NCBI Sequence Viewer  



Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000044639 Ensembl
MGD MGI:3650927 ENTREZGENE
NCBI Gene 574528 ENTREZGENE
PhenoGen Gm11507 PhenoGen